dbCAN Logo

Cluster: SW116_3_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_58477 k141_58477_3 2828 6172 + 1.B.14.6.1
pfam k141_58477 k141_58477_4 6191 8092 + SusD_RagB | SusD-like_3
pfam k141_58477 k141_58477_5 8460 9980 + GHL10
CAZyme k141_58477 k141_58477_6 10186 11352 + GH171
TC k141_58477 k141_58477_7 11466 12926 + 2.A.21.3.7
NULL(UNKNOWN) k141_58477 k141_58477_8 12950 16045 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_58477 k141_58477_9 16053 17912 + Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
CAZyme k141_58477 k141_58477_10 17987 19453 + GT2
Gene ID: k141_58477_3
Type: TC
Location: 2828 - 6172 (+)
Gene ID: k141_58477_4
Type: pfam
Location: 6191 - 8092 (+)
Gene ID: k141_58477_5
Type: pfam
Location: 8460 - 9980 (+)
Gene ID: k141_58477_6
Type: CAZyme
Location: 10186 - 11352 (+)
Gene ID: k141_58477_7
Type: TC
Location: 11466 - 12926 (+)
Gene ID: k141_58477_8
Type:
Location: 12950 - 16045 (+)
Gene ID: k141_58477_9
Type: pfam
Location: 16053 - 17912 (+)
Gene ID: k141_58477_10
Type: CAZyme
Location: 17987 - 19453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List