Cluster: SW116_3_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: pectin/host glycan
- Genome ID: SW116_3
- CGC Family ID: CGCFAM_00110
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28804 | k141_28804_2 | 159 | 3770 | + | GH2 |
| TF | k141_28804 | k141_28804_3 | 4141 | 8079 | - | HTH_AraC |
| TC | k141_28804 | k141_28804_4 | 8385 | 11591 | + | 1.B.14.6.1 |
| pfam | k141_28804 | k141_28804_5 | 11631 | 13490 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| CAZyme | k141_28804 | k141_28804_6 | 13579 | 15909 | + | GH20 |
| CAZyme | k141_28804 | k141_28804_7 | 15963 | 17798 | + | GH29 |
| CAZyme | k141_28804 | k141_28804_8 | 18278 | 21877 | + | GH2 |
Gene ID: k141_28804_2
Type: CAZyme
Location: 159 - 3770 (+)
Type: CAZyme
Location: 159 - 3770 (+)
Gene ID: k141_28804_3
Type: TF
Location: 4141 - 8079 (-)
Type: TF
Location: 4141 - 8079 (-)
Gene ID: k141_28804_4
Type: TC
Location: 8385 - 11591 (+)
Type: TC
Location: 8385 - 11591 (+)
Gene ID: k141_28804_5
Type: pfam
Location: 11631 - 13490 (+)
Type: pfam
Location: 11631 - 13490 (+)
Gene ID: k141_28804_6
Type: CAZyme
Location: 13579 - 15909 (+)
Type: CAZyme
Location: 13579 - 15909 (+)
Gene ID: k141_28804_7
Type: CAZyme
Location: 15963 - 17798 (+)
Type: CAZyme
Location: 15963 - 17798 (+)
Gene ID: k141_28804_8
Type: CAZyme
Location: 18278 - 21877 (+)
Type: CAZyme
Location: 18278 - 21877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900553815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.