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Cluster: SW116_3_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_128447 k141_128447_6 4718 7054 + 1.B.14.8.2
CAZyme k141_128447 k141_128447_7 7207 8766 - CBM91 | GH43_12
CAZyme k141_128447 k141_128447_8 9128 10375 + GH5_4
CAZyme k141_128447 k141_128447_9 10576 12585 + GH2
TF k141_128447 k141_128447_10 12923 17062 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_128447 k141_128447_11 16988 17134 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_128447 k141_128447_12 17183 20041 + GH31_4
CAZyme k141_128447 k141_128447_13 20174 22699 + GH2
CAZyme k141_128447 k141_128447_14 22711 25203 + GH95
CAZyme k141_128447 k141_128447_15 25237 27450 + GH3
CAZyme k141_128447 k141_128447_16 27461 29962 + GH95
Gene ID: k141_128447_6
Type: TC
Location: 4718 - 7054 (+)
Gene ID: k141_128447_7
Type: CAZyme
Location: 7207 - 8766 (-)
Gene ID: k141_128447_8
Type: CAZyme
Location: 9128 - 10375 (+)
Gene ID: k141_128447_9
Type: CAZyme
Location: 10576 - 12585 (+)
Gene ID: k141_128447_10
Type: TF
Location: 12923 - 17062 (+)
Gene ID: k141_128447_11
Type:
Location: 16988 - 17134 (-)
Gene ID: k141_128447_12
Type: CAZyme
Location: 17183 - 20041 (+)
Gene ID: k141_128447_13
Type: CAZyme
Location: 20174 - 22699 (+)
Gene ID: k141_128447_14
Type: CAZyme
Location: 22711 - 25203 (+)
Gene ID: k141_128447_15
Type: CAZyme
Location: 25237 - 27450 (+)
Gene ID: k141_128447_16
Type: CAZyme
Location: 27461 - 29962 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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