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Genome Details

Selected Rep_genome_ID: SW054_bin.33
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola coprophilus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
B38.CMAG_8 3,756,725 98.88% 0.44% China(Inner Mongolia) Asia IMGG
CGMR096454 3,122,636 96.82% 0.62% China Asia CGMR
Rep_515 3,535,413 97.4254% 0.0621891% NA NA WIS
SW054_bin.33 3,276,694 98.65% 0% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
SW054_bin.33_CGC10 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW054_bin.33_CGC22 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW054_bin.33_CGC1 CGCFAM_00005 Yes 5 3
SW054_bin.33_CGC19 CGCFAM_00006 Yes 8 3
SW054_bin.33_CGC30 CGCFAM_00025 Yes 6 3 pectin/alpha-glucan
SW054_bin.33_CGC40 CGCFAM_00038 Yes 4 3
SW054_bin.33_CGC25 CGCFAM_00059 Yes 9 2
SW054_bin.33_CGC14 CGCFAM_00080 Yes 8 1
SW054_bin.33_CGC31 CGCFAM_00081 Yes 12 1
SW054_bin.33_CGC32 CGCFAM_00164 Yes 3 1
SW054_bin.33_CGC17 CGCFAM_00229 Yes 7 1
SW054_bin.33_CGC36 CGCFAM_00375 Yes 6 2
SW054_bin.33_CGC6 CGCFAM_00406 Yes 6 1
SW054_bin.33_CGC16 CGCFAM_00504 Yes 4 1
SW054_bin.33_CGC7 CGCFAM_00538 Yes 3 1
SW054_bin.33_CGC33 CGCFAM_00633 Yes 7 1
SW054_bin.33_CGC27 CGCFAM_00699 Yes 6 2
SW054_bin.33_CGC21 CGCFAM_00755 Yes 7 1
SW054_bin.33_CGC24 CGCFAM_02418 Yes 5 2
SW054_bin.33_CGC5 CGCFAM_02837 Yes 4 1
SW054_bin.33_CGC9 CGCFAM_02865 Yes 17 8
SW054_bin.33_CGC37 CGCFAM_04250 Yes 8 1
Top CAZyme Families