Cluster: SW054_bin.33_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: SW054_bin.33
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30401 | k141_30401_27 | 40399 | 43590 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_30401 | k141_30401_28 | 43610 | 43714 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_30401 | k141_30401_29 | 44566 | 47760 | + | 1.B.14.6.1 |
| pfam | k141_30401 | k141_30401_30 | 47772 | 49841 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_30401 | k141_30401_31 | 50005 | 51705 | + | GH123 |
Gene ID: k141_30401_27
Type: TC
Location: 40399 - 43590 (-)
Type: TC
Location: 40399 - 43590 (-)
Gene ID: k141_30401_28
Type:
Location: 43610 - 43714 (-)
Type:
Location: 43610 - 43714 (-)
Gene ID: k141_30401_29
Type: TC
Location: 44566 - 47760 (+)
Type: TC
Location: 44566 - 47760 (+)
Gene ID: k141_30401_30
Type: pfam
Location: 47772 - 49841 (+)
Type: pfam
Location: 47772 - 49841 (+)
Gene ID: k141_30401_31
Type: CAZyme
Location: 50005 - 51705 (+)
Type: CAZyme
Location: 50005 - 51705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola coprophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.