Cluster: SW054_bin.33_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SW054_bin.33
- CGC Family ID: CGCFAM_00406
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_121642 | k141_121642_1 | 162 | 3773 | - | GH2 |
| NULL(UNKNOWN) | k141_121642 | k141_121642_2 | 3989 | 4549 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_121642 | k141_121642_3 | 4704 | 5864 | - | 3.B.1.1.2 |
| pfam | k141_121642 | k141_121642_4 | 5867 | 6295 | - | Biotin_lipoyl | Biotin_lipoyl_2 |
| pfam | k141_121642 | k141_121642_5 | 6319 | 7248 | - | LTD | OAD_gamma |
| TC | k141_121642 | k141_121642_6 | 7267 | 8820 | - | 3.B.1.1.2 |
Gene ID: k141_121642_1
Type: CAZyme
Location: 162 - 3773 (-)
Type: CAZyme
Location: 162 - 3773 (-)
Gene ID: k141_121642_2
Type:
Location: 3989 - 4549 (+)
Type:
Location: 3989 - 4549 (+)
Gene ID: k141_121642_3
Type: TC
Location: 4704 - 5864 (-)
Type: TC
Location: 4704 - 5864 (-)
Gene ID: k141_121642_4
Type: pfam
Location: 5867 - 6295 (-)
Type: pfam
Location: 5867 - 6295 (-)
Gene ID: k141_121642_5
Type: pfam
Location: 6319 - 7248 (-)
Type: pfam
Location: 6319 - 7248 (-)
Gene ID: k141_121642_6
Type: TC
Location: 7267 - 8820 (-)
Type: TC
Location: 7267 - 8820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola coprophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.