Cluster: SW054_bin.33_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW054_bin.33
- CGC Family ID: CGCFAM_00755
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_125896 | k141_125896_37 | 41922 | 43238 | - | 2.A.13.1.3 |
| pfam | k141_125896 | k141_125896_38 | 43339 | 44292 | + | FMN_dh | NMO | NMO | ThiG |
| TC | k141_125896 | k141_125896_39 | 44427 | 45878 | - | 3.A.1.15.11 |
| CAZyme | k141_125896 | k141_125896_40 | 45888 | 47882 | - | GH13_14 |
| pfam | k141_125896 | k141_125896_41 | 47892 | 48461 | - | RuvC |
| pfam | k141_125896 | k141_125896_42 | 48458 | 48763 | - | DUF4286 |
| TC | k141_125896 | k141_125896_43 | 48910 | 50571 | + | 4.C.1.1.4 |
Gene ID: k141_125896_37
Type: TC
Location: 41922 - 43238 (-)
Type: TC
Location: 41922 - 43238 (-)
Gene ID: k141_125896_38
Type: pfam
Location: 43339 - 44292 (+)
Type: pfam
Location: 43339 - 44292 (+)
Gene ID: k141_125896_39
Type: TC
Location: 44427 - 45878 (-)
Type: TC
Location: 44427 - 45878 (-)
Gene ID: k141_125896_40
Type: CAZyme
Location: 45888 - 47882 (-)
Type: CAZyme
Location: 45888 - 47882 (-)
Gene ID: k141_125896_41
Type: pfam
Location: 47892 - 48461 (-)
Type: pfam
Location: 47892 - 48461 (-)
Gene ID: k141_125896_42
Type: pfam
Location: 48458 - 48763 (-)
Type: pfam
Location: 48458 - 48763 (-)
Gene ID: k141_125896_43
Type: TC
Location: 48910 - 50571 (+)
Type: TC
Location: 48910 - 50571 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola coprophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.