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Genome Details

Selected Rep_genome_ID: SW048_14_sub
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides muris
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
SW048_14_sub 3,622,662 92.1% 1.24% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
SW048_14_sub_CGC26 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW048_14_sub_CGC3 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW048_14_sub_CGC41 CGCFAM_00001 Yes 8 6 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW048_14_sub_CGC6 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW048_14_sub_CGC21 CGCFAM_00017 Yes 5 2 fructan
SW048_14_sub_CGC1 CGCFAM_00043 Yes 5 2 alpha-glucan
SW048_14_sub_CGC40 CGCFAM_00082 Yes 5 2 beta-mannan
SW048_14_sub_CGC16 CGCFAM_00109 Yes 16 7 host glycan
SW048_14_sub_CGC20 CGCFAM_00322 Yes 3 1
SW048_14_sub_CGC8 CGCFAM_00441 Yes 4 1
SW048_14_sub_CGC33 CGCFAM_00547 Yes 6 1
SW048_14_sub_CGC15 CGCFAM_00579 Yes 6 3
SW048_14_sub_CGC35 CGCFAM_00656 Yes 6 3
SW048_14_sub_CGC23 CGCFAM_00934 Yes 12 8 beta-glucan
SW048_14_sub_CGC24 CGCFAM_00937 Yes 14 4
SW048_14_sub_CGC29 CGCFAM_01269 Yes 16 2
SW048_14_sub_CGC12 CGCFAM_05307 Yes 4 1
SW048_14_sub_CGC17 CGCFAM_06553 Yes 9 4
Top CAZyme Families