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Cluster: SW048_14_sub_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_2573 k141_2573_8 5362 8376 + GH3
CAZyme k141_2573 k141_2573_9 8398 11433 + GH3
pfam k141_2573 k141_2573_10 11595 12224 - OMP_b-brl
pfam k141_2573 k141_2573_11 12349 12987 - DUF4136
CAZyme k141_2573 k141_2573_12 13207 15222 - GH97
TC k141_2573 k141_2573_13 15229 16233 - 8.A.5.1.3
CAZyme k141_2573 k141_2573_14 16252 18738 - GH94
CAZyme k141_2573 k141_2573_15 18959 21406 + GH2
TF k141_2573 k141_2573_16 21740 22627 + HTH_AraC | HTH_AraC
CAZyme k141_2573 k141_2573_17 22700 23983 + CE7
CAZyme k141_2573 k141_2573_18 24058 25350 + GH5_7
CAZyme k141_2573 k141_2573_19 25463 26434 + GH5_2
Gene ID: k141_2573_8
Type: CAZyme
Location: 5362 - 8376 (+)
Gene ID: k141_2573_9
Type: CAZyme
Location: 8398 - 11433 (+)
Gene ID: k141_2573_10
Type: pfam
Location: 11595 - 12224 (-)
Gene ID: k141_2573_11
Type: pfam
Location: 12349 - 12987 (-)
Gene ID: k141_2573_12
Type: CAZyme
Location: 13207 - 15222 (-)
Gene ID: k141_2573_13
Type: TC
Location: 15229 - 16233 (-)
Gene ID: k141_2573_14
Type: CAZyme
Location: 16252 - 18738 (-)
Gene ID: k141_2573_15
Type: CAZyme
Location: 18959 - 21406 (+)
Gene ID: k141_2573_16
Type: TF
Location: 21740 - 22627 (+)
Gene ID: k141_2573_17
Type: CAZyme
Location: 22700 - 23983 (+)
Gene ID: k141_2573_18
Type: CAZyme
Location: 24058 - 25350 (+)
Gene ID: k141_2573_19
Type: CAZyme
Location: 25463 - 26434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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