Cluster: SW048_14_sub_CGC17
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: SW048_14_sub
- CGC Family ID: CGCFAM_06553
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_87060 | k141_87060_7 | 3508 | 5784 | - | GH3 |
| NULL(UNKNOWN) | k141_87060 | k141_87060_8 | 5807 | 6547 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_87060 | k141_87060_9 | 6566 | 7939 | - | GH175 |
| pfam | k141_87060 | k141_87060_10 | 7956 | 9080 | - | GDPD |
| CAZyme | k141_87060 | k141_87060_11 | 9119 | 10984 | - | GH127 |
| pfam | k141_87060 | k141_87060_12 | 11332 | 12837 | - | SusD_RagB |
| TC | k141_87060 | k141_87060_13 | 12857 | 16081 | - | 1.B.14.6.1 |
| pfam | k141_87060 | k141_87060_14 | 16882 | 17745 | + | PDDEXK_2 |
| CAZyme | k141_87060 | k141_87060_15 | 18042 | 19145 | - | GH84 |
Gene ID: k141_87060_7
Type: CAZyme
Location: 3508 - 5784 (-)
Type: CAZyme
Location: 3508 - 5784 (-)
Gene ID: k141_87060_8
Type:
Location: 5807 - 6547 (-)
Type:
Location: 5807 - 6547 (-)
Gene ID: k141_87060_9
Type: CAZyme
Location: 6566 - 7939 (-)
Type: CAZyme
Location: 6566 - 7939 (-)
Gene ID: k141_87060_10
Type: pfam
Location: 7956 - 9080 (-)
Type: pfam
Location: 7956 - 9080 (-)
Gene ID: k141_87060_11
Type: CAZyme
Location: 9119 - 10984 (-)
Type: CAZyme
Location: 9119 - 10984 (-)
Gene ID: k141_87060_12
Type: pfam
Location: 11332 - 12837 (-)
Type: pfam
Location: 11332 - 12837 (-)
Gene ID: k141_87060_13
Type: TC
Location: 12857 - 16081 (-)
Type: TC
Location: 12857 - 16081 (-)
Gene ID: k141_87060_14
Type: pfam
Location: 16882 - 17745 (+)
Type: pfam
Location: 16882 - 17745 (+)
Gene ID: k141_87060_15
Type: CAZyme
Location: 18042 - 19145 (-)
Type: CAZyme
Location: 18042 - 19145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides muris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_87060_7 | vegan > omnivore | 1.15577 | 0.03149 |
| k141_87060_8 | vegan > omnivore | 1.38986 | 0.03149 |
| k141_87060_9 | vegan > omnivore | 1.33395 | 0.03822 |
| k141_87060_10 | vegan > omnivore | 1.45919 | 0.02560 |
| k141_87060_11 | vegan > omnivore | 1.52401 | 0.02560 |
| k141_87060_12 | vegan > omnivore | 2.62372 | 0.02560 |
| k141_87060_12 | vegetarian > omnivore | 1.46767 | 0.02695 |
| k141_87060_13 | vegan > omnivore | 2.50978 | 0.03149 |