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Cluster: SW048_14_sub_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_76835 k141_76835_2 159 2363 - GH36
TC k141_76835 k141_76835_3 2689 4095 + 3.A.1.11.8
TC k141_76835 k141_76835_4 4085 4885 + 3.A.1.11.8
TC k141_76835 k141_76835_5 4882 5673 + 3.A.1.11.8
TC k141_76835 k141_76835_6 5715 7046 + 3.A.1.11.2
CAZyme k141_76835 k141_76835_7 7103 8269 + CE9
pfam k141_76835 k141_76835_8 8281 8499 + MatE
pfam k141_76835 k141_76835_9 8496 8786 + MatE
TC k141_76835 k141_76835_10 8872 9546 + 9.B.186.1.3
pfam k141_76835 k141_76835_11 9700 10848 - Cyt_bd_oxida_II
TC k141_76835 k141_76835_12 10869 12443 - 3.D.4.3.2
pfam k141_76835 k141_76835_13 12489 12728 - DUF4492
pfam k141_76835 k141_76835_14 12939 14339 + OEP | OEP
TC k141_76835 k141_76835_15 14352 15581 + 8.A.1.2.2
TC k141_76835 k141_76835_16 15597 16343 + 3.A.1.122.2
TC k141_76835 k141_76835_17 16343 17563 + 3.A.1.122.1
Gene ID: k141_76835_2
Type: CAZyme
Location: 159 - 2363 (-)
Gene ID: k141_76835_3
Type: TC
Location: 2689 - 4095 (+)
Gene ID: k141_76835_4
Type: TC
Location: 4085 - 4885 (+)
Gene ID: k141_76835_5
Type: TC
Location: 4882 - 5673 (+)
Gene ID: k141_76835_6
Type: TC
Location: 5715 - 7046 (+)
Gene ID: k141_76835_7
Type: CAZyme
Location: 7103 - 8269 (+)
Gene ID: k141_76835_8
Type: pfam
Location: 8281 - 8499 (+)
Gene ID: k141_76835_9
Type: pfam
Location: 8496 - 8786 (+)
Gene ID: k141_76835_10
Type: TC
Location: 8872 - 9546 (+)
Gene ID: k141_76835_11
Type: pfam
Location: 9700 - 10848 (-)
Gene ID: k141_76835_12
Type: TC
Location: 10869 - 12443 (-)
Gene ID: k141_76835_13
Type: pfam
Location: 12489 - 12728 (-)
Gene ID: k141_76835_14
Type: pfam
Location: 12939 - 14339 (+)
Gene ID: k141_76835_15
Type: TC
Location: 14352 - 15581 (+)
Gene ID: k141_76835_16
Type: TC
Location: 15597 - 16343 (+)
Gene ID: k141_76835_17
Type: TC
Location: 16343 - 17563 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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