Genome Details
Selected Rep_genome_ID: SPMP06_bin.48
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A91.bin_28 | 5,027,424 | 97.79% | 1.09% | China(Inner Mongolia) | Asia | IMGG |
| CGMR059151 | 4,628,453 | 98.3% | 0.51% | China | Asia | CGMR |
| KY177_bin.57 | 4,892,211 | 97.73% | 0.35% | NA | Africa | H3AfricaPhase2 |
| Rep_498 | 4,909,298 | 99.2718% | 0.701187% | NA | NA | WIS |
| SPMP06_bin.48 | 4,700,715 | 98.81% | 0.24% | Singapore | Asia | SPMP |
| SPMP50_bin.35 | 4,364,421 | 91.01% | 0.81% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SPMP06_bin.48_CGC4 | CGCFAM_01105 | Yes | 8 | 1 | |
| SPMP06_bin.48_CGC76 | CGCFAM_01108 | Yes | 3 | 1 | |
| SPMP06_bin.48_CGC75 | CGCFAM_01543 | Yes | 7 | 2 | |
| SPMP06_bin.48_CGC63 | CGCFAM_01570 | Yes | 4 | 2 | |
| SPMP06_bin.48_CGC35 | CGCFAM_01874 | Yes | 3 | 2 | |
| SPMP06_bin.48_CGC37 | CGCFAM_02415 | Yes | 3 | 1 | |
| SPMP06_bin.48_CGC21 | CGCFAM_03106 | Yes | 5 | 3 | |
| SPMP06_bin.48_CGC72 | CGCFAM_03107 | Yes | 9 | 1 | |
| SPMP06_bin.48_CGC18 | CGCFAM_04132 | Yes | 11 | 7 | |
| SPMP06_bin.48_CGC69 | CGCFAM_05058 | Yes | 3 | 1 | |
| SPMP06_bin.48_CGC47 | CGCFAM_05252 | Yes | 5 | 1 | |
| SPMP06_bin.48_CGC29 | CGCFAM_05531 | Yes | 5 | 1 | |
| SPMP06_bin.48_CGC12 | CGCFAM_05723 | Yes | 8 | 4 | |
| SPMP06_bin.48_CGC20 | CGCFAM_05946 | Yes | 8 | 1 | |
| SPMP06_bin.48_CGC1 | CGCFAM_07297 | Yes | 4 | 2 | |
| SPMP06_bin.48_CGC51 | CGCFAM_09562 | Yes | 4 | 1 | |
| SPMP06_bin.48_CGC6 | CGCFAM_11052 | Yes | 10 | 6 | |
| SPMP06_bin.48_CGC61 | CGCFAM_11296 | Yes | 26 | 9 |
Top CAZyme Families