Cluster: SPMP06_bin.48_CGC75
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_01543
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191943 | opera_contig_191943_129 | 162620 | 165175 | + | GH116 |
| pfam | opera_contig_191943 | opera_contig_191943_130 | 165375 | 165776 | - | FKBP_C |
| peptidase | opera_contig_191943 | opera_contig_191943_131 | 165874 | 171510 | + | I39.UPW |
| CAZyme | opera_contig_191943 | opera_contig_191943_132 | 171525 | 173900 | + | GT51 |
| TC | opera_contig_191943 | opera_contig_191943_133 | 173926 | 175101 | + | 2.A.1.36.3 |
| NULL(UNKNOWN) | opera_contig_191943 | opera_contig_191943_134 | 175151 | 175585 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_191943 | opera_contig_191943_135 | 175740 | 177167 | + | 2.A.35.1.6 |
Gene ID: opera_contig_191943_129
Type: CAZyme
Location: 162620 - 165175 (+)
Type: CAZyme
Location: 162620 - 165175 (+)
Gene ID: opera_contig_191943_130
Type: pfam
Location: 165375 - 165776 (-)
Type: pfam
Location: 165375 - 165776 (-)
Gene ID: opera_contig_191943_131
Type: peptidase
Location: 165874 - 171510 (+)
Type: peptidase
Location: 165874 - 171510 (+)
Gene ID: opera_contig_191943_132
Type: CAZyme
Location: 171525 - 173900 (+)
Type: CAZyme
Location: 171525 - 173900 (+)
Gene ID: opera_contig_191943_133
Type: TC
Location: 173926 - 175101 (+)
Type: TC
Location: 173926 - 175101 (+)
Gene ID: opera_contig_191943_134
Type:
Location: 175151 - 175585 (+)
Type:
Location: 175151 - 175585 (+)
Gene ID: opera_contig_191943_135
Type: TC
Location: 175740 - 177167 (+)
Type: TC
Location: 175740 - 177167 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.