Cluster: SPMP06_bin.48_CGC72
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.48
- CGC Family ID: CGCFAM_03107
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191943 | opera_contig_191943_20 | 19147 | 20040 | - | GH25 |
| pfam | opera_contig_191943 | opera_contig_191943_21 | 20150 | 21796 | - | PFK |
| TC | opera_contig_191943 | opera_contig_191943_22 | 21916 | 23289 | - | 2.A.6.2.20 |
| TC | opera_contig_191943 | opera_contig_191943_23 | 23289 | 26393 | - | 2.A.6.2.25 |
| TC | opera_contig_191943 | opera_contig_191943_24 | 26397 | 27632 | - | 2.A.6.2.19 |
| pfam | opera_contig_191943 | opera_contig_191943_25 | 27907 | 30126 | + | Patatin | Omp85_2 |
| NULL(UNKNOWN) | opera_contig_191943 | opera_contig_191943_26 | 30156 | 30869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_191943 | opera_contig_191943_27 | 30884 | 35599 | - | 2.A.6.3.6 |
| TC | opera_contig_191943 | opera_contig_191943_28 | 35602 | 38712 | - | 2.A.6.3.6 |
Gene ID: opera_contig_191943_20
Type: CAZyme
Location: 19147 - 20040 (-)
Type: CAZyme
Location: 19147 - 20040 (-)
Gene ID: opera_contig_191943_21
Type: pfam
Location: 20150 - 21796 (-)
Type: pfam
Location: 20150 - 21796 (-)
Gene ID: opera_contig_191943_22
Type: TC
Location: 21916 - 23289 (-)
Type: TC
Location: 21916 - 23289 (-)
Gene ID: opera_contig_191943_23
Type: TC
Location: 23289 - 26393 (-)
Type: TC
Location: 23289 - 26393 (-)
Gene ID: opera_contig_191943_24
Type: TC
Location: 26397 - 27632 (-)
Type: TC
Location: 26397 - 27632 (-)
Gene ID: opera_contig_191943_25
Type: pfam
Location: 27907 - 30126 (+)
Type: pfam
Location: 27907 - 30126 (+)
Gene ID: opera_contig_191943_26
Type:
Location: 30156 - 30869 (-)
Type:
Location: 30156 - 30869 (-)
Gene ID: opera_contig_191943_27
Type: TC
Location: 30884 - 35599 (-)
Type: TC
Location: 30884 - 35599 (-)
Gene ID: opera_contig_191943_28
Type: TC
Location: 35602 - 38712 (-)
Type: TC
Location: 35602 - 38712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_191943_26 | vegan > omnivore | 1.43322 | 0.01246 |