Genome Details
Selected Rep_genome_ID: Rep_721
Total Genomes Found: 22
Total Genomes Found: 22
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG510_maxbin.007 | 2,773,728 | 97.96% | 0% | NA | Africa | H3AfricaPhase2 |
| C57.CMAG_3 | 2,894,798 | 97.96% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR054729 | 2,735,805 | 97.96% | 0% | China | Asia | CGMR |
| GCA_021617195.1_ASM2161719v1_genomic | 2,707,727 | 97.96% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021617495.1_ASM2161749v1_genomic | 2,636,088 | 97.96% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021623225.1_ASM2162322v1_genomic | 2,420,264 | 93.54% | 1.02% | NA | Africa | H3AfricaPhase1 |
| GCA_021637505.1_ASM2163750v1_genomic | 2,766,645 | 97.96% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021640505.1_ASM2164050v1_genomic | 2,778,564 | 96.6% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021642055.1_ASM2164205v1_genomic | 2,758,522 | 97.96% | 0% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3763 | 2,964,520 | 97.95% | 0% | NA | NA | HRGM |
| Rep_721 | 3,132,360 | 97.9592% | 0% | NA | NA | WIS |
| SPMP03_bin.2 | 2,834,082 | 97.28% | 0.68% | Singapore | Asia | SPMP |
| SPMP102_bin.112 | 2,717,562 | 94.33% | 0% | Singapore | Asia | SPMP |
| SPMP109_bin.1 | 2,764,936 | 97.96% | 0% | Singapore | Asia | SPMP |
| SPMP11_bin.5 | 2,735,022 | 96.6% | 0% | Singapore | Asia | SPMP |
| SPMP18_bin.145 | 2,902,947 | 91.84% | 0% | Singapore | Asia | SPMP |
| SPMP28_bin.90 | 2,794,485 | 95.88% | 0.68% | Singapore | Asia | SPMP |
| SPMP48_bin.53 | 2,718,244 | 96.6% | 0% | Singapore | Asia | SPMP |
| SPMP49_bin.104 | 2,850,313 | 90.98% | 0% | Singapore | Asia | SPMP |
| SPMP56_bin.2 | 2,720,710 | 95.24% | 0.68% | Singapore | Asia | SPMP |
| SPMP82_bin.3 | 2,662,807 | 97.28% | 0% | Singapore | Asia | SPMP |
| SPMP94_bin.138 | 2,799,310 | 97.28% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_721_CGC7 | CGCFAM_00007 | Yes | 21 | 11 | |
| Rep_721_CGC33 | CGCFAM_00015 | Yes | 7 | 4 | |
| Rep_721_CGC26 | CGCFAM_01284 | Yes | 14 | 7 | |
| Rep_721_CGC10 | CGCFAM_01380 | Yes | 7 | 2 | |
| Rep_721_CGC3 | CGCFAM_02035 | Yes | 6 | 1 | |
| Rep_721_CGC30 | CGCFAM_02549 | Yes | 10 | 4 | |
| Rep_721_CGC19 | CGCFAM_03335 | Yes | 4 | 1 | |
| Rep_721_CGC21 | CGCFAM_04762 | Yes | 6 | 2 | |
| Rep_721_CGC29 | CGCFAM_04768 | Yes | 5 | 2 | |
| Rep_721_CGC27 | CGCFAM_06238 | Yes | 4 | 1 | |
| Rep_721_CGC13 | CGCFAM_10429 | Yes | 4 | 1 | |
| Rep_721_CGC34 | CGCFAM_10848 | Yes | 3 | 1 | |
| Rep_721_CGC37 | CGCFAM_10849 | Yes | 4 | 1 | |
| Rep_721_CGC18 | CGCFAM_10850 | Yes | 3 | 1 |
Top CAZyme Families