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Cluster: Rep_721_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_721_c_0 Rep_721_c_0_510 601021 601566 - GT4
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_511 601573 602031 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_721_c_0 Rep_721_c_0_512 602108 603238 - GT2
pfam Rep_721_c_0 Rep_721_c_0_513 603403 604713 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_514 604726 605670 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_721_c_0 Rep_721_c_0_515 605667 606581 - GT2
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_516 606578 607876 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_721_c_0 Rep_721_c_0_517 607864 608991 - GT4
CAZyme Rep_721_c_0 Rep_721_c_0_518 608996 609976 - GT2
CAZyme Rep_721_c_0 Rep_721_c_0_519 609992 611134 - GT4
CAZyme Rep_721_c_0 Rep_721_c_0_520 611131 612438 - GT4
CAZyme Rep_721_c_0 Rep_721_c_0_521 612467 613453 - GT2
CAZyme Rep_721_c_0 Rep_721_c_0_522 613440 614261 - GT32
CAZyme Rep_721_c_0 Rep_721_c_0_523 614273 615100 - GT2
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_524 615097 616647 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_721_c_0 Rep_721_c_0_525 616660 617400 - GT26
TC Rep_721_c_0 Rep_721_c_0_526 617425 618096 - 9.B.18.1.2
pfam Rep_721_c_0 Rep_721_c_0_527 618150 618821 - CpsB_CapC
TC Rep_721_c_0 Rep_721_c_0_528 618855 621266 - 8.A.3.3.3
TC Rep_721_c_0 Rep_721_c_0_529 621385 622299 - 1.B.18.3.2
TC Rep_721_c_0 Rep_721_c_0_530 623110 625635 + 3.A.12.1.1
Gene ID: Rep_721_c_0_510
Type: CAZyme
Location: 601021 - 601566 (-)
Gene ID: Rep_721_c_0_511
Type:
Location: 601573 - 602031 (-)
Gene ID: Rep_721_c_0_512
Type: CAZyme
Location: 602108 - 603238 (-)
Gene ID: Rep_721_c_0_513
Type: pfam
Location: 603403 - 604713 (-)
Gene ID: Rep_721_c_0_514
Type:
Location: 604726 - 605670 (-)
Gene ID: Rep_721_c_0_515
Type: CAZyme
Location: 605667 - 606581 (-)
Gene ID: Rep_721_c_0_516
Type:
Location: 606578 - 607876 (-)
Gene ID: Rep_721_c_0_517
Type: CAZyme
Location: 607864 - 608991 (-)
Gene ID: Rep_721_c_0_518
Type: CAZyme
Location: 608996 - 609976 (-)
Gene ID: Rep_721_c_0_519
Type: CAZyme
Location: 609992 - 611134 (-)
Gene ID: Rep_721_c_0_520
Type: CAZyme
Location: 611131 - 612438 (-)
Gene ID: Rep_721_c_0_521
Type: CAZyme
Location: 612467 - 613453 (-)
Gene ID: Rep_721_c_0_522
Type: CAZyme
Location: 613440 - 614261 (-)
Gene ID: Rep_721_c_0_523
Type: CAZyme
Location: 614273 - 615100 (-)
Gene ID: Rep_721_c_0_524
Type:
Location: 615097 - 616647 (-)
Gene ID: Rep_721_c_0_525
Type: CAZyme
Location: 616660 - 617400 (-)
Gene ID: Rep_721_c_0_526
Type: TC
Location: 617425 - 618096 (-)
Gene ID: Rep_721_c_0_527
Type: pfam
Location: 618150 - 618821 (-)
Gene ID: Rep_721_c_0_528
Type: TC
Location: 618855 - 621266 (-)
Gene ID: Rep_721_c_0_529
Type: TC
Location: 621385 - 622299 (-)
Gene ID: Rep_721_c_0_530
Type: TC
Location: 623110 - 625635 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_721_c_0_529 vegetarian > omnivore 1.13913 0.01558

🧭 Explore Read Mapping of CGC

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