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Cluster: Rep_721_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_721_c_0 Rep_721_c_0_2318 2673430 2674326 - GT11
CAZyme Rep_721_c_0 Rep_721_c_0_2319 2674346 2675401 - GT2
pfam Rep_721_c_0 Rep_721_c_0_2320 2675398 2676597 - Glyco_trans_1_4
CAZyme Rep_721_c_0 Rep_721_c_0_2321 2677004 2678080 + GT2
peptidase Rep_721_c_0 Rep_721_c_0_2322 2678158 2678721 - C56.UNW
pfam Rep_721_c_0 Rep_721_c_0_2323 2678785 2679825 - Biotin_lipoyl | E3_binding
CAZyme Rep_721_c_0 Rep_721_c_0_2324 2679910 2681058 - CE9
TC Rep_721_c_0 Rep_721_c_0_2325 2681200 2681793 - 3.D.1.8.1
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_2326 2681950 2683293 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_721_c_0 Rep_721_c_0_2327 2683298 2684815 - 2.A.114.1.4
Gene ID: Rep_721_c_0_2318
Type: CAZyme
Location: 2673430 - 2674326 (-)
Gene ID: Rep_721_c_0_2319
Type: CAZyme
Location: 2674346 - 2675401 (-)
Gene ID: Rep_721_c_0_2320
Type: pfam
Location: 2675398 - 2676597 (-)
Gene ID: Rep_721_c_0_2321
Type: CAZyme
Location: 2677004 - 2678080 (+)
Gene ID: Rep_721_c_0_2322
Type: peptidase
Location: 2678158 - 2678721 (-)
Gene ID: Rep_721_c_0_2323
Type: pfam
Location: 2678785 - 2679825 (-)
Gene ID: Rep_721_c_0_2324
Type: CAZyme
Location: 2679910 - 2681058 (-)
Gene ID: Rep_721_c_0_2325
Type: TC
Location: 2681200 - 2681793 (-)
Gene ID: Rep_721_c_0_2326
Type:
Location: 2681950 - 2683293 (-)
Gene ID: Rep_721_c_0_2327
Type: TC
Location: 2683298 - 2684815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_721_c_0_2325 vegetarian > vegan 1.31465 0.00262
Rep_721_c_0_2327 vegetarian > vegan 1.21126 0.00131

🧭 Explore Read Mapping of CGC

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