dbCAN Logo

Cluster: Rep_721_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_721_c_0 Rep_721_c_0_866 1009952 1012138 - GH20
NULL(UNKNOWN) Rep_721_c_0 Rep_721_c_0_867 1012240 1012686 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_721_c_0 Rep_721_c_0_868 1012864 1014249 + 2.A.66.1.32
CAZyme Rep_721_c_0 Rep_721_c_0_869 1014463 1016043 + GH13_5
pfam Rep_721_c_0 Rep_721_c_0_870 1016113 1016595 - DUF386
TF Rep_721_c_0 Rep_721_c_0_871 1016799 1017284 + MerR
TC Rep_721_c_0 Rep_721_c_0_872 1017447 1018004 - 2.A.37.1.1
Gene ID: Rep_721_c_0_866
Type: CAZyme
Location: 1009952 - 1012138 (-)
Gene ID: Rep_721_c_0_867
Type:
Location: 1012240 - 1012686 (-)
Gene ID: Rep_721_c_0_868
Type: TC
Location: 1012864 - 1014249 (+)
Gene ID: Rep_721_c_0_869
Type: CAZyme
Location: 1014463 - 1016043 (+)
Gene ID: Rep_721_c_0_870
Type: pfam
Location: 1016113 - 1016595 (-)
Gene ID: Rep_721_c_0_871
Type: TF
Location: 1016799 - 1017284 (+)
Gene ID: Rep_721_c_0_872
Type: TC
Location: 1017447 - 1018004 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_721_c_0_871 vegetarian > omnivore 1.10474 0.01558

🧭 Explore Read Mapping of CGC

← Back to Cluster List