Genome Details
Selected Rep_genome_ID: Rep_322
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp001701295
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR071792 | 3,020,092 | 97.61% | 1.19% | China | Asia | CGMR |
| HRGMv2_0349 | 3,345,566 | 97.98% | 0.566% | United Kingdom | Europe | HRGM |
| MGYG000000354 | 2,905,675 | 96.48% | 0.57% | Sweden | Europe | UHGG |
| Rep_322 | 3,317,001 | 97.7987% | 0.566038% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_322_CGC12 | CGCFAM_00001 | Yes | 9 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_322_CGC6 | CGCFAM_00001 | Yes | 9 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_322_CGC3 | CGCFAM_00043 | Yes | 7 | 2 | alpha-glucan |
| Rep_322_CGC8 | CGCFAM_00240 | Yes | 10 | 1 | fructan |
| Rep_322_CGC11 | CGCFAM_00896 | Yes | 4 | 2 | |
| Rep_322_CGC10 | CGCFAM_07200 | Yes | 4 | 2 | |
| Rep_322_CGC19 | CGCFAM_11258 | Yes | 3 | 1 |
Top CAZyme Families