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Cluster: Rep_322_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_322_c_0 Rep_322_c_0_835 999953 1002247 - GH3
CAZyme Rep_322_c_0 Rep_322_c_0_836 1002244 1004484 - GH3
CAZyme Rep_322_c_0 Rep_322_c_0_837 1004530 1005768 - GH5_46
CAZyme Rep_322_c_0 Rep_322_c_0_838 1005817 1006950 - GH16_3
NULL(UNKNOWN) Rep_322_c_0 Rep_322_c_0_839 1007115 1008518 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_322_c_0 Rep_322_c_0_840 1008531 1010048 - SusD_RagB | SusD-like_3
TC Rep_322_c_0 Rep_322_c_0_841 1010083 1013268 - 1.B.14.6.1
pfam Rep_322_c_0 Rep_322_c_0_842 1013478 1015274 - DUF6377
TC Rep_322_c_0 Rep_322_c_0_843 1015521 1016963 + 2.A.3.2.7
Gene ID: Rep_322_c_0_835
Type: CAZyme
Location: 999953 - 1002247 (-)
Gene ID: Rep_322_c_0_836
Type: CAZyme
Location: 1002244 - 1004484 (-)
Gene ID: Rep_322_c_0_837
Type: CAZyme
Location: 1004530 - 1005768 (-)
Gene ID: Rep_322_c_0_838
Type: CAZyme
Location: 1005817 - 1006950 (-)
Gene ID: Rep_322_c_0_839
Type:
Location: 1007115 - 1008518 (-)
Gene ID: Rep_322_c_0_840
Type: pfam
Location: 1008531 - 1010048 (-)
Gene ID: Rep_322_c_0_841
Type: TC
Location: 1010083 - 1013268 (-)
Gene ID: Rep_322_c_0_842
Type: pfam
Location: 1013478 - 1015274 (-)
Gene ID: Rep_322_c_0_843
Type: TC
Location: 1015521 - 1016963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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