Cluster: Rep_322_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_322
- CGC Family ID: CGCFAM_00043
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_322_c_0 | Rep_322_c_0_282 | 322343 | 324454 | - | GH97 |
| CAZyme | Rep_322_c_0 | Rep_322_c_0_283 | 324478 | 326283 | - | GH66 |
| pfam | Rep_322_c_0 | Rep_322_c_0_284 | 326384 | 327880 | - | SusE | SusF_SusE | SusF_SusE |
| TC | Rep_322_c_0 | Rep_322_c_0_285 | 327904 | 329400 | - | 8.A.46.1.5 |
| TC | Rep_322_c_0 | Rep_322_c_0_286 | 329419 | 332607 | - | 1.B.14.6.1 |
| pfam | Rep_322_c_0 | Rep_322_c_0_287 | 332663 | 334342 | - | DUF6377 |
| TC | Rep_322_c_0 | Rep_322_c_0_288 | 334498 | 335466 | + | 1.A.34.1.3 |
Gene ID: Rep_322_c_0_282
Type: CAZyme
Location: 322343 - 324454 (-)
Type: CAZyme
Location: 322343 - 324454 (-)
Gene ID: Rep_322_c_0_283
Type: CAZyme
Location: 324478 - 326283 (-)
Type: CAZyme
Location: 324478 - 326283 (-)
Gene ID: Rep_322_c_0_284
Type: pfam
Location: 326384 - 327880 (-)
Type: pfam
Location: 326384 - 327880 (-)
Gene ID: Rep_322_c_0_285
Type: TC
Location: 327904 - 329400 (-)
Type: TC
Location: 327904 - 329400 (-)
Gene ID: Rep_322_c_0_286
Type: TC
Location: 329419 - 332607 (-)
Type: TC
Location: 329419 - 332607 (-)
Gene ID: Rep_322_c_0_287
Type: pfam
Location: 332663 - 334342 (-)
Type: pfam
Location: 332663 - 334342 (-)
Gene ID: Rep_322_c_0_288
Type: TC
Location: 334498 - 335466 (+)
Type: TC
Location: 334498 - 335466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp001701295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.