Genome Details
Selected Rep_genome_ID: Rep_206
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553595
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0403 | 2,918,225 | 97.36% | 0% | United Kingdom | Europe | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_I_4_2616.40 | 2,642,638 | 94.72% | 0.37% | NA | Africa | Hadza |
| Rep_206 | 3,181,225 | 98.6574% | 0% | NA | NA | WIS |
| SW221_72 | 2,925,008 | 99.21% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_206_CGC13 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_206_CGC25 | CGCFAM_00001 | Yes | 5 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_206_CGC37 | CGCFAM_00007 | Yes | 5 | 2 | |
| Rep_206_CGC5 | CGCFAM_00072 | Yes | 5 | 3 | |
| Rep_206_CGC4 | CGCFAM_00192 | Yes | 6 | 2 | |
| Rep_206_CGC10 | CGCFAM_00288 | Yes | 3 | 1 | |
| Rep_206_CGC48 | CGCFAM_00376 | Yes | 7 | 3 | host glycan |
| Rep_206_CGC19 | CGCFAM_00417 | Yes | 11 | 3 | |
| Rep_206_CGC43 | CGCFAM_00901 | Yes | 11 | 3 | |
| Rep_206_CGC47 | CGCFAM_01356 | Yes | 4 | 2 | |
| Rep_206_CGC26 | CGCFAM_01388 | Yes | 7 | 1 | |
| Rep_206_CGC15 | CGCFAM_01560 | Yes | 4 | 1 | |
| Rep_206_CGC8 | CGCFAM_01664 | Yes | 5 | 2 | |
| Rep_206_CGC7 | CGCFAM_02870 | Yes | 3 | 1 | |
| Rep_206_CGC12 | CGCFAM_03044 | Yes | 6 | 3 | |
| Rep_206_CGC3 | CGCFAM_04961 | Yes | 3 | 1 | |
| Rep_206_CGC32 | CGCFAM_07680 | Yes | 4 | 1 | |
| Rep_206_CGC29 | CGCFAM_10261 | Yes | 3 | 1 | |
| Rep_206_CGC33 | CGCFAM_11246 | Yes | 3 | 1 |
Top CAZyme Families