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Cluster: Rep_206_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_206_c_3 Rep_206_c_3_832 956707 957879 + GT30
TC Rep_206_c_3 Rep_206_c_3_833 958132 958881 - 9.B.158.1.1
CAZyme Rep_206_c_3 Rep_206_c_3_834 959087 959818 + GH27
CAZyme Rep_206_c_3 Rep_206_c_3_835 959831 960301 + GH27
pfam Rep_206_c_3 Rep_206_c_3_836 960844 961752 + PorP_SprF
TC Rep_206_c_3 Rep_206_c_3_837 961766 963214 + 9.A.25.1.1
pfam Rep_206_c_3 Rep_206_c_3_838 963245 964075 + GldL_N
TC Rep_206_c_3 Rep_206_c_3_839 964089 965633 + 9.A.25.1.1
pfam Rep_206_c_3 Rep_206_c_3_840 965687 966724 + GldN
pfam Rep_206_c_3 Rep_206_c_3_841 966756 967385 + OMP_b-brl | OMP_b-brl_2
TC Rep_206_c_3 Rep_206_c_3_842 967502 969775 + 3.A.11.3.1
Gene ID: Rep_206_c_3_832
Type: CAZyme
Location: 956707 - 957879 (+)
Gene ID: Rep_206_c_3_833
Type: TC
Location: 958132 - 958881 (-)
Gene ID: Rep_206_c_3_834
Type: CAZyme
Location: 959087 - 959818 (+)
Gene ID: Rep_206_c_3_835
Type: CAZyme
Location: 959831 - 960301 (+)
Gene ID: Rep_206_c_3_836
Type: pfam
Location: 960844 - 961752 (+)
Gene ID: Rep_206_c_3_837
Type: TC
Location: 961766 - 963214 (+)
Gene ID: Rep_206_c_3_838
Type: pfam
Location: 963245 - 964075 (+)
Gene ID: Rep_206_c_3_839
Type: TC
Location: 964089 - 965633 (+)
Gene ID: Rep_206_c_3_840
Type: pfam
Location: 965687 - 966724 (+)
Gene ID: Rep_206_c_3_841
Type: pfam
Location: 966756 - 967385 (+)
Gene ID: Rep_206_c_3_842
Type: TC
Location: 967502 - 969775 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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