Cluster: Rep_206_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_206
- CGC Family ID: CGCFAM_00192
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_206_c_1 | Rep_206_c_1_139 | 161058 | 161858 | + | GT5 |
| pfam | Rep_206_c_1 | Rep_206_c_1_140 | 161875 | 163335 | + | DUF4270 |
| NULL(UNKNOWN) | Rep_206_c_1 | Rep_206_c_1_141 | 163346 | 163480 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_206_c_1 | Rep_206_c_1_142 | 163586 | 164932 | + | CBM50 |
| pfam | Rep_206_c_1 | Rep_206_c_1_143 | 164941 | 165687 | + | OMP_b-brl_2 |
| TC | Rep_206_c_1 | Rep_206_c_1_144 | 165819 | 167345 | + | 2.A.17.1.6 |
Gene ID: Rep_206_c_1_139
Type: CAZyme
Location: 161058 - 161858 (+)
Type: CAZyme
Location: 161058 - 161858 (+)
Gene ID: Rep_206_c_1_140
Type: pfam
Location: 161875 - 163335 (+)
Type: pfam
Location: 161875 - 163335 (+)
Gene ID: Rep_206_c_1_141
Type:
Location: 163346 - 163480 (+)
Type:
Location: 163346 - 163480 (+)
Gene ID: Rep_206_c_1_142
Type: CAZyme
Location: 163586 - 164932 (+)
Type: CAZyme
Location: 163586 - 164932 (+)
Gene ID: Rep_206_c_1_143
Type: pfam
Location: 164941 - 165687 (+)
Type: pfam
Location: 164941 - 165687 (+)
Gene ID: Rep_206_c_1_144
Type: TC
Location: 165819 - 167345 (+)
Type: TC
Location: 165819 - 167345 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.