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Cluster: Rep_206_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_206_c_2 Rep_206_c_2_669 841688 843607 + 9.B.18.2.1
TC Rep_206_c_2 Rep_206_c_2_670 843971 845380 + 2.A.66.2.6
NULL(UNKNOWN) Rep_206_c_2 Rep_206_c_2_671 845384 846514 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_206_c_2 Rep_206_c_2_672 846606 847844 + GT4
pfam Rep_206_c_2 Rep_206_c_2_673 847841 848701 + ATPgrasp_TupA
CAZyme Rep_206_c_2 Rep_206_c_2_674 848708 849814 + GT4
pfam Rep_206_c_2 Rep_206_c_2_675 849816 850481 + Hexapep
NULL(UNKNOWN) Rep_206_c_2 Rep_206_c_2_676 850954 851706 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_206_c_2 Rep_206_c_2_677 851781 852374 + 9.B.18.1.3
pfam Rep_206_c_2 Rep_206_c_2_678 852379 852975 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme Rep_206_c_2 Rep_206_c_2_679 853235 854242 + GT4
Gene ID: Rep_206_c_2_669
Type: TC
Location: 841688 - 843607 (+)
Gene ID: Rep_206_c_2_670
Type: TC
Location: 843971 - 845380 (+)
Gene ID: Rep_206_c_2_671
Type:
Location: 845384 - 846514 (+)
Gene ID: Rep_206_c_2_672
Type: CAZyme
Location: 846606 - 847844 (+)
Gene ID: Rep_206_c_2_673
Type: pfam
Location: 847841 - 848701 (+)
Gene ID: Rep_206_c_2_674
Type: CAZyme
Location: 848708 - 849814 (+)
Gene ID: Rep_206_c_2_675
Type: pfam
Location: 849816 - 850481 (+)
Gene ID: Rep_206_c_2_676
Type:
Location: 850954 - 851706 (+)
Gene ID: Rep_206_c_2_677
Type: TC
Location: 851781 - 852374 (+)
Gene ID: Rep_206_c_2_678
Type: pfam
Location: 852379 - 852975 (+)
Gene ID: Rep_206_c_2_679
Type: CAZyme
Location: 853235 - 854242 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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