Cluster: Rep_206_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_206
- CGC Family ID: CGCFAM_03044
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_206_c_2 | Rep_206_c_2_270 | 345215 | 346153 | + | GT2 |
| CAZyme | Rep_206_c_2 | Rep_206_c_2_271 | 346359 | 348164 | - | GT83 |
| TC | Rep_206_c_2 | Rep_206_c_2_272 | 348480 | 350141 | - | 2.A.81.1.2 |
| TC | Rep_206_c_2 | Rep_206_c_2_273 | 350333 | 351055 | + | 3.A.1.13.2 |
| pfam | Rep_206_c_2 | Rep_206_c_2_274 | 351611 | 351760 | + | Phage_integrase |
| CAZyme | Rep_206_c_2 | Rep_206_c_2_275 | 351914 | 354592 | - | GH2 |
Gene ID: Rep_206_c_2_270
Type: CAZyme
Location: 345215 - 346153 (+)
Type: CAZyme
Location: 345215 - 346153 (+)
Gene ID: Rep_206_c_2_271
Type: CAZyme
Location: 346359 - 348164 (-)
Type: CAZyme
Location: 346359 - 348164 (-)
Gene ID: Rep_206_c_2_272
Type: TC
Location: 348480 - 350141 (-)
Type: TC
Location: 348480 - 350141 (-)
Gene ID: Rep_206_c_2_273
Type: TC
Location: 350333 - 351055 (+)
Type: TC
Location: 350333 - 351055 (+)
Gene ID: Rep_206_c_2_274
Type: pfam
Location: 351611 - 351760 (+)
Type: pfam
Location: 351611 - 351760 (+)
Gene ID: Rep_206_c_2_275
Type: CAZyme
Location: 351914 - 354592 (-)
Type: CAZyme
Location: 351914 - 354592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.