Genome Details
Selected Rep_genome_ID: MGYG000003452
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium ruminantium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000003452 | 2,217,592 | 99.55% | 0.45% | Fiji | Oceania | UHGG |
| Rep_841 | 1,928,861 | 95.6926% | 1.02273% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000003452_CGC9 | CGCFAM_00002 | Yes | 10 | 5 | |
| MGYG000003452_CGC1 | CGCFAM_00035 | Yes | 6 | 1 | fructan |
| MGYG000003452_CGC16 | CGCFAM_00214 | Yes | 3 | 1 | alpha-glucan |
| MGYG000003452_CGC18 | CGCFAM_00825 | Yes | 13 | 3 | alpha-glucan |
| MGYG000003452_CGC25 | CGCFAM_00991 | Yes | 5 | 1 | |
| MGYG000003452_CGC20 | CGCFAM_01326 | Yes | 28 | 6 | |
| MGYG000003452_CGC6 | CGCFAM_02433 | Yes | 7 | 1 | |
| MGYG000003452_CGC5 | CGCFAM_03417 | Yes | 20 | 5 | |
| MGYG000003452_CGC22 | CGCFAM_04491 | Yes | 3 | 1 | |
| MGYG000003452_CGC29 | CGCFAM_05671 | Yes | 3 | 1 | |
| MGYG000003452_CGC10 | CGCFAM_06803 | Yes | 11 | 1 | |
| MGYG000003452_CGC21 | CGCFAM_09484 | Yes | 7 | 1 | |
| MGYG000003452_CGC4 | CGCFAM_09491 | Yes | 3 | 1 | |
| MGYG000003452_CGC12 | CGCFAM_09493 | Yes | 6 | 2 | |
| MGYG000003452_CGC15 | CGCFAM_10953 | Yes | 4 | 2 | |
| MGYG000003452_CGC3 | CGCFAM_10954 | Yes | 22 | 1 |
Top CAZyme Families