Cluster: MGYG000003452_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003452
- CGC Family ID: CGCFAM_09484
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003452_14 | MGYG000003452_14_36 | 49251 | 50378 | - | 3.A.1.1.23 |
| TF | MGYG000003452_14 | MGYG000003452_14_37 | 50706 | 51422 | + | LytTR |
| pfam | MGYG000003452_14 | MGYG000003452_14_38 | 51419 | 52759 | + | HATPase_c_5 |
| TC | MGYG000003452_14 | MGYG000003452_14_39 | 52802 | 54112 | - | 2.A.49.9.3 |
| NULL(UNKNOWN) | MGYG000003452_14 | MGYG000003452_14_40 | 54692 | 54883 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003452_14 | MGYG000003452_14_41 | 54953 | 55528 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000003452_14 | MGYG000003452_14_42 | 55521 | 57917 | - | GH3 |
Gene ID: MGYG000003452_14_36
Type: TC
Location: 49251 - 50378 (-)
Type: TC
Location: 49251 - 50378 (-)
Gene ID: MGYG000003452_14_37
Type: TF
Location: 50706 - 51422 (+)
Type: TF
Location: 50706 - 51422 (+)
Gene ID: MGYG000003452_14_38
Type: pfam
Location: 51419 - 52759 (+)
Type: pfam
Location: 51419 - 52759 (+)
Gene ID: MGYG000003452_14_39
Type: TC
Location: 52802 - 54112 (-)
Type: TC
Location: 52802 - 54112 (-)
Gene ID: MGYG000003452_14_40
Type:
Location: 54692 - 54883 (+)
Type:
Location: 54692 - 54883 (+)
Gene ID: MGYG000003452_14_41
Type: pfam
Location: 54953 - 55528 (-)
Type: pfam
Location: 54953 - 55528 (-)
Gene ID: MGYG000003452_14_42
Type: CAZyme
Location: 55521 - 57917 (-)
Type: CAZyme
Location: 55521 - 57917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium ruminantium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.