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Cluster: MGYG000003452_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003452_12 MGYG000003452_12_8 11806 13860 - GH13_14
TC MGYG000003452_12 MGYG000003452_12_9 13876 14775 - 3.A.1.1.27
TC MGYG000003452_12 MGYG000003452_12_10 14772 16175 - 3.A.1.1.27
NULL(UNKNOWN) MGYG000003452_12 MGYG000003452_12_11 16295 16405 + NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000003452_12 MGYG000003452_12_12 16417 17661 - SBP_bac_1
CAZyme MGYG000003452_12 MGYG000003452_12_13 17901 19484 + GH13_44
CAZyme MGYG000003452_12 MGYG000003452_12_14 19890 22064 + GH77
TC MGYG000003452_12 MGYG000003452_12_15 22313 22759 - 8.A.9.1.2
TC MGYG000003452_12 MGYG000003452_12_16 22980 23582 + 9.B.28.1.3
TC MGYG000003452_12 MGYG000003452_12_17 24437 25279 - 3.A.1.1.45
TC MGYG000003452_12 MGYG000003452_12_18 25276 26130 - 3.A.1.1.45
TF MGYG000003452_12 MGYG000003452_12_19 26497 27507 + LacI
TC MGYG000003452_12 MGYG000003452_12_20 27749 29047 - 3.A.1.1.45
Gene ID: MGYG000003452_12_8
Type: CAZyme
Location: 11806 - 13860 (-)
Gene ID: MGYG000003452_12_9
Type: TC
Location: 13876 - 14775 (-)
Gene ID: MGYG000003452_12_10
Type: TC
Location: 14772 - 16175 (-)
Gene ID: MGYG000003452_12_11
Type:
Location: 16295 - 16405 (+)
Gene ID: MGYG000003452_12_12
Type: STP
Location: 16417 - 17661 (-)
Gene ID: MGYG000003452_12_13
Type: CAZyme
Location: 17901 - 19484 (+)
Gene ID: MGYG000003452_12_14
Type: CAZyme
Location: 19890 - 22064 (+)
Gene ID: MGYG000003452_12_15
Type: TC
Location: 22313 - 22759 (-)
Gene ID: MGYG000003452_12_16
Type: TC
Location: 22980 - 23582 (+)
Gene ID: MGYG000003452_12_17
Type: TC
Location: 24437 - 25279 (-)
Gene ID: MGYG000003452_12_18
Type: TC
Location: 25276 - 26130 (-)
Gene ID: MGYG000003452_12_19
Type: TF
Location: 26497 - 27507 (+)
Gene ID: MGYG000003452_12_20
Type: TC
Location: 27749 - 29047 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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