Genome Details
Selected Rep_genome_ID: MGYG000002787
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus pentosus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR078434 | 3,075,921 | 95.68% | 2.01% | China | Asia | CGMR |
| MGYG000002787 | 3,358,325 | 99.38% | 2.01% | US | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000002787_CGC34 | CGCFAM_00004 | Yes | 6 | 3 | alpha-glucan |
| MGYG000002787_CGC15 | CGCFAM_00020 | Yes | 6 | 1 | host glycan/beta-glucan |
| MGYG000002787_CGC29 | CGCFAM_00255 | Yes | 7 | 2 | |
| MGYG000002787_CGC6 | CGCFAM_00585 | Yes | 33 | 8 | |
| MGYG000002787_CGC22 | CGCFAM_01335 | Yes | 4 | 1 | |
| MGYG000002787_CGC33 | CGCFAM_01559 | Yes | 6 | 2 | |
| MGYG000002787_CGC4 | CGCFAM_02442 | Yes | 3 | 1 | |
| MGYG000002787_CGC23 | CGCFAM_05732 | Yes | 4 | 1 | |
| PUL0604_MGYG000002787_C1 | CGCFAM_06376 | Yes | 4 | 1 | beta-mannan |
| MGYG000002787_CGC18 | CGCFAM_07263 | Yes | 11 | 1 | |
| MGYG000002787_CGC12 | CGCFAM_08874 | Yes | 7 | 1 | |
| MGYG000002787_CGC24 | CGCFAM_08875 | Yes | 15 | 3 | |
| MGYG000002787_CGC1 | CGCFAM_08876 | Yes | 18 | 7 | |
| MGYG000002787_CGC2 | CGCFAM_08877 | Yes | 12 | 5 | |
| MGYG000002787_CGC27 | CGCFAM_10768 | Yes | 3 | 1 |
Top CAZyme Families