Cluster: MGYG000002787_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002787
- CGC Family ID: CGCFAM_08874
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002787_9 | MGYG000002787_9_59 | 63241 | 64017 | - | GH25 |
| TF | MGYG000002787_9 | MGYG000002787_9_60 | 64042 | 64920 | - | HTH_6 |
| pfam | MGYG000002787_9 | MGYG000002787_9_61 | 65139 | 66020 | - | DUF915 |
| TC | MGYG000002787_9 | MGYG000002787_9_62 | 66013 | 67329 | - | 4.A.3.2.8 |
| pfam | MGYG000002787_9 | MGYG000002787_9_63 | 67680 | 69125 | - | DUF4097 |
| TF | MGYG000002787_9 | MGYG000002787_9_64 | 69109 | 69468 | - | PadR |
| TC | MGYG000002787_9 | MGYG000002787_9_65 | 70120 | 72459 | - | 3.A.3.23.2 |
Gene ID: MGYG000002787_9_59
Type: CAZyme
Location: 63241 - 64017 (-)
Type: CAZyme
Location: 63241 - 64017 (-)
Gene ID: MGYG000002787_9_60
Type: TF
Location: 64042 - 64920 (-)
Type: TF
Location: 64042 - 64920 (-)
Gene ID: MGYG000002787_9_61
Type: pfam
Location: 65139 - 66020 (-)
Type: pfam
Location: 65139 - 66020 (-)
Gene ID: MGYG000002787_9_62
Type: TC
Location: 66013 - 67329 (-)
Type: TC
Location: 66013 - 67329 (-)
Gene ID: MGYG000002787_9_63
Type: pfam
Location: 67680 - 69125 (-)
Type: pfam
Location: 67680 - 69125 (-)
Gene ID: MGYG000002787_9_64
Type: TF
Location: 69109 - 69468 (-)
Type: TF
Location: 69109 - 69468 (-)
Gene ID: MGYG000002787_9_65
Type: TC
Location: 70120 - 72459 (-)
Type: TC
Location: 70120 - 72459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus pentosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.