Cluster: MGYG000002787_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002787
- CGC Family ID: CGCFAM_00255
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002787_50 | MGYG000002787_50_4 | 2764 | 4833 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | MGYG000002787_50 | MGYG000002787_50_5 | 5466 | 5663 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000002787_50 | MGYG000002787_50_6 | 5813 | 6079 | + | PTS-HPr |
| TC | MGYG000002787_50 | MGYG000002787_50_7 | 6079 | 7809 | + | 8.A.7.1.1 |
| NULL(UNKNOWN) | MGYG000002787_50 | MGYG000002787_50_8 | 7860 | 8126 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002787_50 | MGYG000002787_50_9 | 9619 | 10797 | + | GT4 |
| CAZyme | MGYG000002787_50 | MGYG000002787_50_10 | 10850 | 11872 | + | GT4 |
Gene ID: MGYG000002787_50_4
Type: TC
Location: 2764 - 4833 (-)
Type: TC
Location: 2764 - 4833 (-)
Gene ID: MGYG000002787_50_5
Type:
Location: 5466 - 5663 (+)
Type:
Location: 5466 - 5663 (+)
Gene ID: MGYG000002787_50_6
Type: STP
Location: 5813 - 6079 (+)
Type: STP
Location: 5813 - 6079 (+)
Gene ID: MGYG000002787_50_7
Type: TC
Location: 6079 - 7809 (+)
Type: TC
Location: 6079 - 7809 (+)
Gene ID: MGYG000002787_50_8
Type:
Location: 7860 - 8126 (+)
Type:
Location: 7860 - 8126 (+)
Gene ID: MGYG000002787_50_9
Type: CAZyme
Location: 9619 - 10797 (+)
Type: CAZyme
Location: 9619 - 10797 (+)
Gene ID: MGYG000002787_50_10
Type: CAZyme
Location: 10850 - 11872 (+)
Type: CAZyme
Location: 10850 - 11872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus pentosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.