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Cluster: MGYG000002787_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002787_24 MGYG000002787_24_22 20100 21575 + 3.A.1.3.20
TC MGYG000002787_24 MGYG000002787_24_23 21568 22308 + 3.A.1.3.25
pfam MGYG000002787_24 MGYG000002787_24_24 22692 24506 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
pfam MGYG000002787_24 MGYG000002787_24_25 24908 25663 + Wzz | GNVR
TC MGYG000002787_24 MGYG000002787_24_26 25678 26394 + 8.A.3.2.1
pfam MGYG000002787_24 MGYG000002787_24_27 26333 27154 + CpsB_CapC
pfam MGYG000002787_24 MGYG000002787_24_28 27170 28105 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
TC MGYG000002787_24 MGYG000002787_24_29 28098 28763 + 9.B.18.1.3
CAZyme MGYG000002787_24 MGYG000002787_24_30 28764 29855 + GT4
CAZyme MGYG000002787_24 MGYG000002787_24_31 29872 30912 + GT4
NULL(UNKNOWN) MGYG000002787_24 MGYG000002787_24_32 30896 32170 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002787_24 MGYG000002787_24_33 32155 33105 + GT2
pfam MGYG000002787_24 MGYG000002787_24_34 33360 34805 + MatE | Polysacc_synt
pfam MGYG000002787_24 MGYG000002787_24_35 34891 36213 - Metallophos
TC MGYG000002787_24 MGYG000002787_24_36 36345 38309 - 4.A.2.1.7
Gene ID: MGYG000002787_24_22
Type: TC
Location: 20100 - 21575 (+)
Gene ID: MGYG000002787_24_23
Type: TC
Location: 21568 - 22308 (+)
Gene ID: MGYG000002787_24_24
Type: pfam
Location: 22692 - 24506 (+)
Gene ID: MGYG000002787_24_25
Type: pfam
Location: 24908 - 25663 (+)
Gene ID: MGYG000002787_24_26
Type: TC
Location: 25678 - 26394 (+)
Gene ID: MGYG000002787_24_27
Type: pfam
Location: 26333 - 27154 (+)
Gene ID: MGYG000002787_24_28
Type: pfam
Location: 27170 - 28105 (+)
Gene ID: MGYG000002787_24_29
Type: TC
Location: 28098 - 28763 (+)
Gene ID: MGYG000002787_24_30
Type: CAZyme
Location: 28764 - 29855 (+)
Gene ID: MGYG000002787_24_31
Type: CAZyme
Location: 29872 - 30912 (+)
Gene ID: MGYG000002787_24_32
Type:
Location: 30896 - 32170 (+)
Gene ID: MGYG000002787_24_33
Type: CAZyme
Location: 32155 - 33105 (+)
Gene ID: MGYG000002787_24_34
Type: pfam
Location: 33360 - 34805 (+)
Gene ID: MGYG000002787_24_35
Type: pfam
Location: 34891 - 36213 (-)
Gene ID: MGYG000002787_24_36
Type: TC
Location: 36345 - 38309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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