Genome Details
Selected Rep_genome_ID: MGYG000002779
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000002779 | 3,078,380 | 98.41% | 1.9% | US | North America | UHGG |
| Rep_1209 | 3,136,886 | 98.0952% | 3.26984% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000002779_CGC39 | CGCFAM_00012 | Yes | 7 | 2 | host glycan/beta-glucan |
| MGYG000002779_CGC4 | CGCFAM_00015 | Yes | 4 | 1 | |
| MGYG000002779_CGC31 | CGCFAM_00545 | Yes | 7 | 1 | |
| MGYG000002779_CGC32 | CGCFAM_00545 | Yes | 6 | 1 | |
| MGYG000002779_CGC33 | CGCFAM_00545 | Yes | 4 | 1 | |
| MGYG000002779_CGC3 | CGCFAM_01512 | Yes | 4 | 1 | |
| MGYG000002779_CGC15 | CGCFAM_02979 | Yes | 3 | 1 | |
| MGYG000002779_CGC41 | CGCFAM_02983 | Yes | 5 | 1 | |
| MGYG000002779_CGC21 | CGCFAM_04238 | Yes | 7 | 1 | |
| MGYG000002779_CGC6 | CGCFAM_04284 | Yes | 8 | 1 | |
| MGYG000002779_CGC34 | CGCFAM_04516 | Yes | 4 | 1 | |
| MGYG000002779_CGC17 | CGCFAM_05747 | Yes | 5 | 2 | |
| MGYG000002779_CGC2 | CGCFAM_06689 | Yes | 4 | 1 | |
| MGYG000002779_CGC5 | CGCFAM_08295 | Yes | 14 | 3 | |
| MGYG000002779_CGC19 | CGCFAM_08744 | Yes | 10 | 2 | |
| MGYG000002779_CGC22 | CGCFAM_10881 | Yes | 5 | 1 |
Top CAZyme Families