Cluster: MGYG000002779_CGC41
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002779
- CGC Family ID: CGCFAM_02983
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_40 | MGYG000002779_40_1 | 1616 | 3805 | - | GH123 |
| TC | MGYG000002779_40 | MGYG000002779_40_2 | 4401 | 6884 | + | 9.B.34.1.3 |
| TF | MGYG000002779_40 | MGYG000002779_40_3 | 7016 | 7489 | + | MarR |
| pfam | MGYG000002779_40 | MGYG000002779_40_4 | 7679 | 8296 | + | Hexapep | Mac | Hexapep_2 |
| TC | MGYG000002779_40 | MGYG000002779_40_5 | 8461 | 9807 | + | 2.A.66.1.32 |
Gene ID: MGYG000002779_40_1
Type: CAZyme
Location: 1616 - 3805 (-)
Type: CAZyme
Location: 1616 - 3805 (-)
Gene ID: MGYG000002779_40_2
Type: TC
Location: 4401 - 6884 (+)
Type: TC
Location: 4401 - 6884 (+)
Gene ID: MGYG000002779_40_3
Type: TF
Location: 7016 - 7489 (+)
Type: TF
Location: 7016 - 7489 (+)
Gene ID: MGYG000002779_40_4
Type: pfam
Location: 7679 - 8296 (+)
Type: pfam
Location: 7679 - 8296 (+)
Gene ID: MGYG000002779_40_5
Type: TC
Location: 8461 - 9807 (+)
Type: TC
Location: 8461 - 9807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.