Cluster: MGYG000002779_CGC5
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002779
- CGC Family ID: CGCFAM_08295
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_2 | MGYG000002779_2_149 | 156838 | 157869 | - | GT2 |
| pfam | MGYG000002779_2 | MGYG000002779_2_150 | 158800 | 159987 | - | Radical_SAM | SPASM |
| CAZyme | MGYG000002779_2 | MGYG000002779_2_151 | 160012 | 161211 | - | GT4 |
| CAZyme | MGYG000002779_2 | MGYG000002779_2_152 | 161528 | 162415 | - | GT4 |
| pfam | MGYG000002779_2 | MGYG000002779_2_153 | 163306 | 164073 | - | CpsB_CapC |
| TC | MGYG000002779_2 | MGYG000002779_2_154 | 164070 | 164825 | - | 8.A.3.1.2 |
| TC | MGYG000002779_2 | MGYG000002779_2_155 | 164825 | 165532 | - | 8.A.3.2.3 |
| pfam | MGYG000002779_2 | MGYG000002779_2_156 | 165573 | 166622 | - | LytR_cpsA_psr |
| pfam | MGYG000002779_2 | MGYG000002779_2_157 | 166747 | 167259 | - | NusG |
| TC | MGYG000002779_2 | MGYG000002779_2_158 | 167259 | 167939 | - | 9.B.18.1.2 |
| pfam | MGYG000002779_2 | MGYG000002779_2_159 | 168310 | 169371 | - | Exo_endo_phos |
| TC | MGYG000002779_2 | MGYG000002779_2_160 | 169484 | 171238 | - | 3.D.1.5.1 |
| TC | MGYG000002779_2 | MGYG000002779_2_161 | 171255 | 173141 | - | 3.D.1.5.1 |
| TC | MGYG000002779_2 | MGYG000002779_2_162 | 173163 | 173657 | - | 3.D.1.5.1 |
Gene ID: MGYG000002779_2_149
Type: CAZyme
Location: 156838 - 157869 (-)
Type: CAZyme
Location: 156838 - 157869 (-)
Gene ID: MGYG000002779_2_150
Type: pfam
Location: 158800 - 159987 (-)
Type: pfam
Location: 158800 - 159987 (-)
Gene ID: MGYG000002779_2_151
Type: CAZyme
Location: 160012 - 161211 (-)
Type: CAZyme
Location: 160012 - 161211 (-)
Gene ID: MGYG000002779_2_152
Type: CAZyme
Location: 161528 - 162415 (-)
Type: CAZyme
Location: 161528 - 162415 (-)
Gene ID: MGYG000002779_2_153
Type: pfam
Location: 163306 - 164073 (-)
Type: pfam
Location: 163306 - 164073 (-)
Gene ID: MGYG000002779_2_154
Type: TC
Location: 164070 - 164825 (-)
Type: TC
Location: 164070 - 164825 (-)
Gene ID: MGYG000002779_2_155
Type: TC
Location: 164825 - 165532 (-)
Type: TC
Location: 164825 - 165532 (-)
Gene ID: MGYG000002779_2_156
Type: pfam
Location: 165573 - 166622 (-)
Type: pfam
Location: 165573 - 166622 (-)
Gene ID: MGYG000002779_2_157
Type: pfam
Location: 166747 - 167259 (-)
Type: pfam
Location: 166747 - 167259 (-)
Gene ID: MGYG000002779_2_158
Type: TC
Location: 167259 - 167939 (-)
Type: TC
Location: 167259 - 167939 (-)
Gene ID: MGYG000002779_2_159
Type: pfam
Location: 168310 - 169371 (-)
Type: pfam
Location: 168310 - 169371 (-)
Gene ID: MGYG000002779_2_160
Type: TC
Location: 169484 - 171238 (-)
Type: TC
Location: 169484 - 171238 (-)
Gene ID: MGYG000002779_2_161
Type: TC
Location: 171255 - 173141 (-)
Type: TC
Location: 171255 - 173141 (-)
Gene ID: MGYG000002779_2_162
Type: TC
Location: 173163 - 173657 (-)
Type: TC
Location: 173163 - 173657 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.