Cluster: MGYG000002779_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000002779
- CGC Family ID: CGCFAM_00012
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_34 | MGYG000002779_34_8 | 7740 | 9194 | + | GH1 |
| TF | MGYG000002779_34 | MGYG000002779_34_9 | 9252 | 10058 | - | HTH_6 |
| TF | MGYG000002779_34 | MGYG000002779_34_10 | 10055 | 10849 | - | HTH_6 |
| TC | MGYG000002779_34 | MGYG000002779_34_11 | 11043 | 12344 | + | 4.A.3.2.3 |
| TC | MGYG000002779_34 | MGYG000002779_34_12 | 12416 | 12721 | + | 4.A.3.2.2 |
| TC | MGYG000002779_34 | MGYG000002779_34_13 | 12718 | 13020 | + | 4.A.3.1.1 |
| CAZyme | MGYG000002779_34 | MGYG000002779_34_14 | 13041 | 14480 | + | GH1 |
Gene ID: MGYG000002779_34_8
Type: CAZyme
Location: 7740 - 9194 (+)
Type: CAZyme
Location: 7740 - 9194 (+)
Gene ID: MGYG000002779_34_9
Type: TF
Location: 9252 - 10058 (-)
Type: TF
Location: 9252 - 10058 (-)
Gene ID: MGYG000002779_34_10
Type: TF
Location: 10055 - 10849 (-)
Type: TF
Location: 10055 - 10849 (-)
Gene ID: MGYG000002779_34_11
Type: TC
Location: 11043 - 12344 (+)
Type: TC
Location: 11043 - 12344 (+)
Gene ID: MGYG000002779_34_12
Type: TC
Location: 12416 - 12721 (+)
Type: TC
Location: 12416 - 12721 (+)
Gene ID: MGYG000002779_34_13
Type: TC
Location: 12718 - 13020 (+)
Type: TC
Location: 12718 - 13020 (+)
Gene ID: MGYG000002779_34_14
Type: CAZyme
Location: 13041 - 14480 (+)
Type: CAZyme
Location: 13041 - 14480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.