Cluster: MGYG000002779_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002779
- CGC Family ID: CGCFAM_04516
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_29 | MGYG000002779_29_32 | 28481 | 29893 | - | CE4 |
| TF | MGYG000002779_29 | MGYG000002779_29_33 | 30377 | 30847 | + | MarR |
| TC | MGYG000002779_29 | MGYG000002779_29_34 | 30851 | 32611 | + | 3.A.1.106.15 |
| TC | MGYG000002779_29 | MGYG000002779_29_35 | 32598 | 34250 | + | 3.A.1.135.9 |
Gene ID: MGYG000002779_29_32
Type: CAZyme
Location: 28481 - 29893 (-)
Type: CAZyme
Location: 28481 - 29893 (-)
Gene ID: MGYG000002779_29_33
Type: TF
Location: 30377 - 30847 (+)
Type: TF
Location: 30377 - 30847 (+)
Gene ID: MGYG000002779_29_34
Type: TC
Location: 30851 - 32611 (+)
Type: TC
Location: 30851 - 32611 (+)
Gene ID: MGYG000002779_29_35
Type: TC
Location: 32598 - 34250 (+)
Type: TC
Location: 32598 - 34250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.