Genome Details
Selected Rep_genome_ID: MGYG000001279
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000001279 | 4,682,858 | 96.48% | 1.7% | Italy | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000001279_CGC18 | CGCFAM_00003 | Yes | 5 | 2 | |
| MGYG000001279_CGC15 | CGCFAM_00281 | Yes | 6 | 2 | |
| MGYG000001279_CGC20 | CGCFAM_00359 | Yes | 5 | 1 | |
| MGYG000001279_CGC23 | CGCFAM_01454 | Yes | 3 | 1 | |
| MGYG000001279_CGC7 | CGCFAM_01485 | Yes | 8 | 2 | alginate |
| MGYG000001279_CGC22 | CGCFAM_02108 | Yes | 4 | 1 | |
| MGYG000001279_CGC3 | CGCFAM_03927 | Yes | 9 | 1 | |
| MGYG000001279_CGC2 | CGCFAM_09157 | Yes | 8 | 3 | |
| MGYG000001279_CGC11 | CGCFAM_09164 | Yes | 11 | 4 |
Top CAZyme Families