Cluster: MGYG000001279_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- CGC Family ID: CGCFAM_00359
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001279_266 | MGYG000001279_266_1 | 2 | 1432 | + | GH23 |
| TC | MGYG000001279_266 | MGYG000001279_266_2 | 1562 | 3391 | + | 3.A.1.5.21 |
| TC | MGYG000001279_266 | MGYG000001279_266_3 | 3388 | 5223 | + | 3.A.1.5.21 |
| TC | MGYG000001279_266 | MGYG000001279_266_4 | 5225 | 6298 | + | 3.A.1.5.21 |
| TC | MGYG000001279_266 | MGYG000001279_266_5 | 6300 | 6449 | + | 3.A.1.5.21 |
Gene ID: MGYG000001279_266_1
Type: CAZyme
Location: 2 - 1432 (+)
Type: CAZyme
Location: 2 - 1432 (+)
Gene ID: MGYG000001279_266_2
Type: TC
Location: 1562 - 3391 (+)
Type: TC
Location: 1562 - 3391 (+)
Gene ID: MGYG000001279_266_3
Type: TC
Location: 3388 - 5223 (+)
Type: TC
Location: 3388 - 5223 (+)
Gene ID: MGYG000001279_266_4
Type: TC
Location: 5225 - 6298 (+)
Type: TC
Location: 5225 - 6298 (+)
Gene ID: MGYG000001279_266_5
Type: TC
Location: 6300 - 6449 (+)
Type: TC
Location: 6300 - 6449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.