Cluster: MGYG000001279_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- CGC Family ID: CGCFAM_02108
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001279_330 | MGYG000001279_330_2 | 603 | 1367 | + | 2.A.121.1.1 |
| pfam | MGYG000001279_330 | MGYG000001279_330_3 | 1411 | 1626 | + | DUF2389 |
| TC | MGYG000001279_330 | MGYG000001279_330_4 | 1741 | 3057 | - | 1.B.52.2.2 |
| CAZyme | MGYG000001279_330 | MGYG000001279_330_5 | 3231 | 4421 | + | GT4 |
Gene ID: MGYG000001279_330_2
Type: TC
Location: 603 - 1367 (+)
Type: TC
Location: 603 - 1367 (+)
Gene ID: MGYG000001279_330_3
Type: pfam
Location: 1411 - 1626 (+)
Type: pfam
Location: 1411 - 1626 (+)
Gene ID: MGYG000001279_330_4
Type: TC
Location: 1741 - 3057 (-)
Type: TC
Location: 1741 - 3057 (-)
Gene ID: MGYG000001279_330_5
Type: CAZyme
Location: 3231 - 4421 (+)
Type: CAZyme
Location: 3231 - 4421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.