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Genome Details

Selected Rep_genome_ID: MGYG000000964
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola salanitronis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
MGYG000000964 3,100,012 96.65% 0% Denmark Europe UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
MGYG000000964_CGC13 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
MGYG000000964_CGC7 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
MGYG000000964_CGC16 CGCFAM_00016 Yes 13 6 host glycan
MGYG000000964_CGC18 CGCFAM_00017 Yes 6 1 fructan
MGYG000000964_CGC31 CGCFAM_00023 Yes 6 2
MGYG000000964_CGC32 CGCFAM_00080 Yes 4 1
MGYG000000964_CGC8 CGCFAM_00082 Yes 6 3 beta-mannan
MGYG000000964_CGC23 CGCFAM_00101 Yes 7 3 beta-glucan
MGYG000000964_CGC36 CGCFAM_00129 Yes 5 2 beta-mannan
MGYG000000964_CGC6 CGCFAM_00147 Yes 3 2
MGYG000000964_CGC45 CGCFAM_00305 Yes 4 1
MGYG000000964_CGC44 CGCFAM_00478 Yes 3 1
MGYG000000964_CGC43 CGCFAM_00743 Yes 5 3
MGYG000000964_CGC12 CGCFAM_01912 Yes 9 6
MGYG000000964_CGC30 CGCFAM_02873 Yes 5 2
MGYG000000964_CGC29 CGCFAM_03101 Yes 4 2
MGYG000000964_CGC20 CGCFAM_03189 Yes 6 3
MGYG000000964_CGC1 CGCFAM_03236 Yes 3 1
MGYG000000964_CGC11 CGCFAM_03677 Yes 3 1
MGYG000000964_CGC27 CGCFAM_03821 Yes 8 4
MGYG000000964_CGC39 CGCFAM_04868 Yes 3 1
MGYG000000964_CGC40 CGCFAM_06391 Yes 13 7
MGYG000000964_CGC15 CGCFAM_10780 Yes 3 1
MGYG000000964_CGC26 CGCFAM_10781 Yes 10 7
MGYG000000964_CGC28 CGCFAM_10782 Yes 4 1
Top CAZyme Families