Cluster: MGYG000000964_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000964
- CGC Family ID: CGCFAM_10782
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000964_23 | MGYG000000964_23_34 | 37108 | 39600 | - | 9.B.144.1.4 |
| pfam | MGYG000000964_23 | MGYG000000964_23_35 | 39624 | 40385 | + | PNP_UDP_1 |
| pfam | MGYG000000964_23 | MGYG000000964_23_36 | 40398 | 40877 | + | LuxS |
| CAZyme | MGYG000000964_23 | MGYG000000964_23_37 | 40885 | 44094 | - | GH106 |
Gene ID: MGYG000000964_23_34
Type: TC
Location: 37108 - 39600 (-)
Type: TC
Location: 37108 - 39600 (-)
Gene ID: MGYG000000964_23_35
Type: pfam
Location: 39624 - 40385 (+)
Type: pfam
Location: 39624 - 40385 (+)
Gene ID: MGYG000000964_23_36
Type: pfam
Location: 40398 - 40877 (+)
Type: pfam
Location: 40398 - 40877 (+)
Gene ID: MGYG000000964_23_37
Type: CAZyme
Location: 40885 - 44094 (-)
Type: CAZyme
Location: 40885 - 44094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.