Cluster: MGYG000000964_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: MGYG000000964
- CGC Family ID: CGCFAM_00017
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000964_12 | MGYG000000964_12_20 | 25777 | 26940 | - | 2.A.1.7.17 |
| CAZyme | MGYG000000964_12 | MGYG000000964_12_21 | 27033 | 28856 | - | GH32 |
| pfam | MGYG000000964_12 | MGYG000000964_12_22 | 29130 | 30899 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000000964_12 | MGYG000000964_12_23 | 30921 | 34046 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000000964_12 | MGYG000000964_12_24 | 34061 | 34192 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000964_12 | MGYG000000964_12_25 | 34455 | 36248 | - | 3.A.24.1.1 |
Gene ID: MGYG000000964_12_20
Type: TC
Location: 25777 - 26940 (-)
Type: TC
Location: 25777 - 26940 (-)
Gene ID: MGYG000000964_12_21
Type: CAZyme
Location: 27033 - 28856 (-)
Type: CAZyme
Location: 27033 - 28856 (-)
Gene ID: MGYG000000964_12_22
Type: pfam
Location: 29130 - 30899 (-)
Type: pfam
Location: 29130 - 30899 (-)
Gene ID: MGYG000000964_12_23
Type: TC
Location: 30921 - 34046 (-)
Type: TC
Location: 30921 - 34046 (-)
Gene ID: MGYG000000964_12_24
Type:
Location: 34061 - 34192 (-)
Type:
Location: 34061 - 34192 (-)
Gene ID: MGYG000000964_12_25
Type: TC
Location: 34455 - 36248 (-)
Type: TC
Location: 34455 - 36248 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.