Cluster: MGYG000000964_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: MGYG000000964
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000964_7 | MGYG000000964_7_40 | 57586 | 61299 | + | 1.B.14.6.1 |
| pfam | MGYG000000964_7 | MGYG000000964_7_41 | 61319 | 63433 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000000964_7 | MGYG000000964_7_42 | 63497 | 66058 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000964_7 | MGYG000000964_7_43 | 66165 | 69530 | + | GH2 |
| CAZyme | MGYG000000964_7 | MGYG000000964_7_44 | 69564 | 71552 | + | CE19 |
| CAZyme | MGYG000000964_7 | MGYG000000964_7_45 | 71676 | 74084 | + | GH31_9 |
| CAZyme | MGYG000000964_7 | MGYG000000964_7_46 | 74101 | 77133 | + | GH2 |
| TC | MGYG000000964_7 | MGYG000000964_7_47 | 77457 | 80603 | + | 1.B.14.6.1 |
Gene ID: MGYG000000964_7_40
Type: TC
Location: 57586 - 61299 (+)
Type: TC
Location: 57586 - 61299 (+)
Gene ID: MGYG000000964_7_41
Type: pfam
Location: 61319 - 63433 (+)
Type: pfam
Location: 61319 - 63433 (+)
Gene ID: MGYG000000964_7_42
Type:
Location: 63497 - 66058 (+)
Type:
Location: 63497 - 66058 (+)
Gene ID: MGYG000000964_7_43
Type: CAZyme
Location: 66165 - 69530 (+)
Type: CAZyme
Location: 66165 - 69530 (+)
Gene ID: MGYG000000964_7_44
Type: CAZyme
Location: 69564 - 71552 (+)
Type: CAZyme
Location: 69564 - 71552 (+)
Gene ID: MGYG000000964_7_45
Type: CAZyme
Location: 71676 - 74084 (+)
Type: CAZyme
Location: 71676 - 74084 (+)
Gene ID: MGYG000000964_7_46
Type: CAZyme
Location: 74101 - 77133 (+)
Type: CAZyme
Location: 74101 - 77133 (+)
Gene ID: MGYG000000964_7_47
Type: TC
Location: 77457 - 80603 (+)
Type: TC
Location: 77457 - 80603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.