Cluster: MGYG000000964_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate: host glycan
- Genome ID: MGYG000000964
- CGC Family ID: CGCFAM_00016
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000964_10 | MGYG000000964_10_27 | 26271 | 28223 | - | GH18 |
| pfam | MGYG000000964_10 | MGYG000000964_10_28 | 28264 | 29469 | - | Pentaxin | BT_3987-like_N | Laminin_G_3 |
| pfam | MGYG000000964_10 | MGYG000000964_10_29 | 29480 | 30502 | - | GH18_BT1044-like |
| TC | MGYG000000964_10 | MGYG000000964_10_30 | 30529 | 32178 | - | 8.A.46.2.2 |
| TC | MGYG000000964_10 | MGYG000000964_10_31 | 32191 | 35583 | - | 1.B.14.6.13 |
| TF | MGYG000000964_10 | MGYG000000964_10_32 | 36334 | 36864 | - | GerE |
| CAZyme | MGYG000000964_10 | MGYG000000964_10_33 | 37062 | 39278 | + | GH92 |
| STP | MGYG000000964_10 | MGYG000000964_10_34 | 39587 | 40558 | + | FecR |
| CAZyme | MGYG000000964_10 | MGYG000000964_10_35 | 40587 | 42860 | + | GH92 |
| CAZyme | MGYG000000964_10 | MGYG000000964_10_36 | 43061 | 45343 | + | GH92 |
| pfam | MGYG000000964_10 | MGYG000000964_10_37 | 45353 | 46714 | + | MFS_1 | MFS_1 |
| CAZyme | MGYG000000964_10 | MGYG000000964_10_38 | 46762 | 47730 | + | GH130_2 |
| CAZyme | MGYG000000964_10 | MGYG000000964_10_39 | 47848 | 50106 | + | GH92 |
Gene ID: MGYG000000964_10_27
Type: CAZyme
Location: 26271 - 28223 (-)
Type: CAZyme
Location: 26271 - 28223 (-)
Gene ID: MGYG000000964_10_28
Type: pfam
Location: 28264 - 29469 (-)
Type: pfam
Location: 28264 - 29469 (-)
Gene ID: MGYG000000964_10_29
Type: pfam
Location: 29480 - 30502 (-)
Type: pfam
Location: 29480 - 30502 (-)
Gene ID: MGYG000000964_10_30
Type: TC
Location: 30529 - 32178 (-)
Type: TC
Location: 30529 - 32178 (-)
Gene ID: MGYG000000964_10_31
Type: TC
Location: 32191 - 35583 (-)
Type: TC
Location: 32191 - 35583 (-)
Gene ID: MGYG000000964_10_32
Type: TF
Location: 36334 - 36864 (-)
Type: TF
Location: 36334 - 36864 (-)
Gene ID: MGYG000000964_10_33
Type: CAZyme
Location: 37062 - 39278 (+)
Type: CAZyme
Location: 37062 - 39278 (+)
Gene ID: MGYG000000964_10_34
Type: STP
Location: 39587 - 40558 (+)
Type: STP
Location: 39587 - 40558 (+)
Gene ID: MGYG000000964_10_35
Type: CAZyme
Location: 40587 - 42860 (+)
Type: CAZyme
Location: 40587 - 42860 (+)
Gene ID: MGYG000000964_10_36
Type: CAZyme
Location: 43061 - 45343 (+)
Type: CAZyme
Location: 43061 - 45343 (+)
Gene ID: MGYG000000964_10_37
Type: pfam
Location: 45353 - 46714 (+)
Type: pfam
Location: 45353 - 46714 (+)
Gene ID: MGYG000000964_10_38
Type: CAZyme
Location: 46762 - 47730 (+)
Type: CAZyme
Location: 46762 - 47730 (+)
Gene ID: MGYG000000964_10_39
Type: CAZyme
Location: 47848 - 50106 (+)
Type: CAZyme
Location: 47848 - 50106 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.