Genome Details
Selected Rep_genome_ID: HRGMv2_4355
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus stilesii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR042883 | 1,728,030 | 91.2% | 0.93% | China | Asia | CGMR |
| HRGMv2_4355 | 1,734,645 | 97.53% | 0.925% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4355_CGC10 | CGCFAM_01120 | Yes | 12 | 2 | |
| HRGMv2_4355_CGC12 | CGCFAM_01680 | Yes | 16 | 5 | |
| HRGMv2_4355_CGC4 | CGCFAM_02380 | Yes | 4 | 1 | |
| HRGMv2_4355_CGC2 | CGCFAM_05689 | Yes | 10 | 2 | |
| HRGMv2_4355_CGC15 | CGCFAM_05690 | Yes | 5 | 1 | |
| HRGMv2_4355_CGC7 | CGCFAM_08796 | Yes | 5 | 1 |
Top CAZyme Families