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Cluster: HRGMv2_4355_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4355_2 HRGMv2_4355_2_93 90794 92302 + CE20
pfam HRGMv2_4355_2 HRGMv2_4355_2_94 92405 93178 - adh_short | KR | adh_short_C2
TC HRGMv2_4355_2 HRGMv2_4355_2_95 93560 93955 + 4.A.6.1.21
NULL(UNKNOWN) HRGMv2_4355_2 HRGMv2_4355_2_96 93962 95992 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4355_2 HRGMv2_4355_2_97 96014 96508 + 4.A.6.1.18
TC HRGMv2_4355_2 HRGMv2_4355_2_98 96524 97435 + 4.A.6.1.18
TC HRGMv2_4355_2 HRGMv2_4355_2_99 97419 98249 + 4.A.6.1.18
TF HRGMv2_4355_2 HRGMv2_4355_2_100 98274 99059 + GntR
STP HRGMv2_4355_2 HRGMv2_4355_2_101 99083 100258 + SIS | SIS
CAZyme HRGMv2_4355_2 HRGMv2_4355_2_102 100270 101415 + CE9
Gene ID: HRGMv2_4355_2_93
Type: CAZyme
Location: 90794 - 92302 (+)
Gene ID: HRGMv2_4355_2_94
Type: pfam
Location: 92405 - 93178 (-)
Gene ID: HRGMv2_4355_2_95
Type: TC
Location: 93560 - 93955 (+)
Gene ID: HRGMv2_4355_2_96
Type:
Location: 93962 - 95992 (+)
Gene ID: HRGMv2_4355_2_97
Type: TC
Location: 96014 - 96508 (+)
Gene ID: HRGMv2_4355_2_98
Type: TC
Location: 96524 - 97435 (+)
Gene ID: HRGMv2_4355_2_99
Type: TC
Location: 97419 - 98249 (+)
Gene ID: HRGMv2_4355_2_100
Type: TF
Location: 98274 - 99059 (+)
Gene ID: HRGMv2_4355_2_101
Type: STP
Location: 99083 - 100258 (+)
Gene ID: HRGMv2_4355_2_102
Type: CAZyme
Location: 100270 - 101415 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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