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Cluster: HRGMv2_4355_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4355_14 HRGMv2_4355_14_36 30534 32288 + 2.A.16.2.2
peptidase HRGMv2_4355_14 HRGMv2_4355_14_37 32384 33088 + M10.UPA
peptidase HRGMv2_4355_14 HRGMv2_4355_14_38 33264 34400 + S12.UNW
TC HRGMv2_4355_14 HRGMv2_4355_14_39 34416 35198 + 8.A.3.2.4
TC HRGMv2_4355_14 HRGMv2_4355_14_40 35207 35950 + 8.A.3.2.1
NULL(UNKNOWN) HRGMv2_4355_14 HRGMv2_4355_14_41 35998 37149 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4355_14 HRGMv2_4355_14_42 37149 37934 + CpsB_CapC
TC HRGMv2_4355_14 HRGMv2_4355_14_43 37953 38585 + 9.B.18.1.2
CAZyme HRGMv2_4355_14 HRGMv2_4355_14_44 38603 39364 + GT111
CAZyme HRGMv2_4355_14 HRGMv2_4355_14_45 39392 40444 + GT4
CAZyme HRGMv2_4355_14 HRGMv2_4355_14_46 40454 41437 + GT2
pfam HRGMv2_4355_14 HRGMv2_4355_14_47 41434 42420 + Stealth_CR2
CAZyme HRGMv2_4355_14 HRGMv2_4355_14_48 42447 43472 + GT113
STP HRGMv2_4355_14 HRGMv2_4355_14_49 43563 44681 + Pyr_redox
TC HRGMv2_4355_14 HRGMv2_4355_14_50 44709 46133 + 2.A.66.2.16
CAZyme HRGMv2_4355_14 HRGMv2_4355_14_51 46152 47108 + GT2
Gene ID: HRGMv2_4355_14_36
Type: TC
Location: 30534 - 32288 (+)
Gene ID: HRGMv2_4355_14_37
Type: peptidase
Location: 32384 - 33088 (+)
Gene ID: HRGMv2_4355_14_38
Type: peptidase
Location: 33264 - 34400 (+)
Gene ID: HRGMv2_4355_14_39
Type: TC
Location: 34416 - 35198 (+)
Gene ID: HRGMv2_4355_14_40
Type: TC
Location: 35207 - 35950 (+)
Gene ID: HRGMv2_4355_14_41
Type:
Location: 35998 - 37149 (+)
Gene ID: HRGMv2_4355_14_42
Type: pfam
Location: 37149 - 37934 (+)
Gene ID: HRGMv2_4355_14_43
Type: TC
Location: 37953 - 38585 (+)
Gene ID: HRGMv2_4355_14_44
Type: CAZyme
Location: 38603 - 39364 (+)
Gene ID: HRGMv2_4355_14_45
Type: CAZyme
Location: 39392 - 40444 (+)
Gene ID: HRGMv2_4355_14_46
Type: CAZyme
Location: 40454 - 41437 (+)
Gene ID: HRGMv2_4355_14_47
Type: pfam
Location: 41434 - 42420 (+)
Gene ID: HRGMv2_4355_14_48
Type: CAZyme
Location: 42447 - 43472 (+)
Gene ID: HRGMv2_4355_14_49
Type: STP
Location: 43563 - 44681 (+)
Gene ID: HRGMv2_4355_14_50
Type: TC
Location: 44709 - 46133 (+)
Gene ID: HRGMv2_4355_14_51
Type: CAZyme
Location: 46152 - 47108 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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