PROTEIN: HRGMv2_4355_14_41
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Protein File & Metadata
Source:
HRGMv2_4355_14_41.pdb
Genome ID:
Protein ID:
HRGMv2_4355_14_41
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Protein Sequence
MKIKLGPQLS LCGYVVLLCA YTLFAYTELS VQRNFSTILT LFKIVSIILM LLGALFQKYH 60 IWELLLYICL GGLGLLIYKS TGISDIMITL IAVISLKSVP FKSIVKTDFV SRTLLTIVIM 120 VAASINMIPS NDFYSNNKLG FIRHSLGFYH PNLLGAYILI LTIEFVFLMY TAKKNKTALL 180 SIPFSVIFLE LVSNSRSAEL ALMLYLVVFC LLSRINITSK LLKAWTVIAT VFVSSLSIVS 240 SIMYNYSSSF WFYIDQVLSG RPRMIHTVVT EIYPIRLIAE KTSLLGLEQG INLNGKISIF 300 FIDNSYMSIL IKYGMLAFII FIVWMITNSF KYLNQSDKLI MFCWLIALLF WGMSEGKLLA 360 IQFNILLFSY VKHSEKVEEG QGE 383
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 1 | 383 | 3 | 394 | 0.7195 |
0.7788 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 1 | 380 | 12 | 423 | 0.7055 |
0.7695 |
| AF-A2S058-F1-model_v4 | GH39 | 1 | 375 | 1 | 396 | 0.6836 |
0.7553 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 1 | 378 | 20 | 394 | 0.6466 |
0.8795 |
| B7AUF6 | GT4 | 1 | 379 | 12 | 385 | 0.6356 |
0.889 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 3 | 378 | 17 | 418 | 0.5373 |
0.7634 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 3 | 378 | 17 | 418 | 0.5368 |
0.7627 |
| AF-M4X4V7-F1-model_v4 | GH39 | 3 | 378 | 17 | 420 | 0.5358 |
0.7621 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 380 | 12 | 423 | 0.7055 |
0.7695 |
| A2S058 | GH39 | 1 | 375 | 1 | 396 | 0.6836 |
0.7553 |
| A0A7L9SQD7 | GT4 | 1 | 378 | 20 | 394 | 0.6466 |
0.8795 |
| B7AUF6 | GT4 | 1 | 379 | 12 | 385 | 0.6356 |
0.889 |
| M4X4V7 | GH39 | 3 | 378 | 17 | 420 | 0.5358 |
0.7621 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4UM04-F1-model_v4 | 5 | 380 | 1 | 407 | 0.6521 |
0.7082 |